| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1110 |
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| Symbol | |
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| ID | 5706675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 1250172 |
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| End bp | 1252652 |
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| Gene Length | 2481 bp |
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| Protein Length | 826 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641270625 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_001536009 |
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| Protein GI | 159036756 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain
[COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.396242 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0036434 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCGACGG CGGACCCGCG CAACTCCGTC CCGCCAGGAC GGAGCGCGCC GTTCTTCGCC
TTCGTGGCGG TGGTCCTCGC CCTGGCCACG CTGGCGTCGG TGGGTCCGTT GCTGGCGCTG
CCCGACCAGG TGTCCCGGCT GCCCGCCGCG TTCTGGACCA TGGCCGTGTT AGCGATCGCC
TGCGACGCCC GGCCGTTCGT CCCGCAGGGG AGGCGACAGT CGTCGGCGGT GTTTCCGTCG
ACCTGCTTCA CCTTCGCGAT CCTGCTGGGC TGGGGGCTGG GCCCGGCGGT CGCCGTGCAG
ACGGTGGCGG TGGTGGTGTC CGGAGTCCGG ATGGGACACG CCTCCTGGCG GACCGCATTC
AACGCCGGCC AGTACGCGTG CGCCCTCGCC GCGGCCCATC TCCTCATCGG CCTCGGCCCG
GGTGACCTGT TCGGTGGGGG ACAACTGGGC TGGACCGACG TGGTGGTGGT CGGTGGCGCG
ATGCTCGCCT GGTTCGTTGT CAACTACGGG CTGGTCAGCT CGGCGGTGTG GCTGCGCTTC
GGGGCGCGGT GGCGGCCCGG GCTGCGGCAG GGGCTGGGGT TCGAGCTGCT GTCCACCGGC
TCGCTGTTGC TGCTCGCCCC GGTGCTGGTC TCGGCGGCCC AGACGAGCGC GGCTCTGGTC
CCACTGGTGC TGGTGCCGCT GTTCGCGGTC TATCAGATGG CCCGGCTCAG CGTCGAGCAG
GAGCAGCTTG CCTCGCTCGA CCCGCTTACC GGCCTGCCCA ACCGCAAGGC ACTGGTCGCC
GAGGTGGGCG AGCAGTTGCA CCGACACGCG GAACGGGCGG CGGACGGTTC GGCGCCGGCG
CGGCTGGCGC TACTGCTGCT CGACCTGGAC CGGTTCAAGC ACGTCAACGA CGCACTCGGT
CATGCGGTGG GGGATCGCCT GCTGGTCGAG GTGAGCGCCC GCCTGACCGA GGTTGTCGGC
CCGGACCTGG TCGCCCGACT CGGCGGAGAC GAGTTCGCCG TCGTGTTGAC CGGGCTGACC
GACGTCGGTG AGGCCCGGCG CCGGGCCGAC CGGGTGGTGG CCGCGTTGGC GGAGCCGGTC
ACGTTGGACG GGCTGCCGTT GGATGTCGGC GGGTCGATCG GCGTCGCGCT CTTTCCCGAC
CACGGGGAGG ACTTCGCCAC CCTGATGCGC CACGCGGACG TGGCGATGTA CGACGCGAAG
CAGCGCAACG ACACGGTCGC CGTCTACGCG GCCGAGTCCG ATCACAACTC GGCCGAGCGG
CTCGGCCTCC TCGCCGACCT GCGTCAGGTC CTGGCCTCCG GCCTCGGCCA GAGTGCGGAC
GGTGGTGGCG CCGGGGGTGA TGGTGCGGAC GGTGGTGGTG CGGACCAGGG TCGGAACGGG
CCGGCGCTCG CGGCGGTCCC GGTGGTCGGC GGTGACGGCG CGGCGCTGCC CCGCACTGAT
GCGGCGCTGC CCCGCACCGA CGCGGTGGGC GTCGGCAGGT GGTCGTTGCG GGGTCGGCGG
CAGCGCGTGC ACCTGGTCCA CTCCGACGAG CTGATCCAGC GGATCGTCAC CGCGGCCGAC
CCGATCCGTC GCCGTACCAC CGTCGGCTCG GCCGGTCAGC CGGCTACCGG CCAGGCCGTT
GACCATTCGA TCGAGCCGGA CCGGGCGCCG GAGGTCGGGG GGCCGGTGGG GCACGGCGCC
GGCCAGGCCG ACCCGGGCGG CGCGGGCGAG ATCACCATGT ACTACCAGCC GCAGGTCGCC
ATCGCCACCG GCGAGGTGGT CGGTGTCGAG GCGCTGCTGC GCTGGCGCCA CCCCCGTCGC
GGAATGGTCG ACCCGGAGGA ACTGATCCGG GTGGCCGAGC AGAGCGCGGT GATGCGCCTG
CTCACCTTCC GGGTCATCGA CGACGTGGTG GCGCAGCTGG CGCGGTGGCA GGCGGCGGGC
GTGGGTCTGC GGGCCGCGAT GAACGTCAGC GTCCGCGACC TGCACACCGG GGAGATCGCC
GACCGGATCG CGGAGCGGCT CGCCCGGTAC GGCGTACCGC CCCAACTCCT CCAGGTGGAG
ATCACCGAGG GAGCACTGAT GGCCGATCCA CGCCGGGTGC TCGCCACCAT CACCCGGCTG
CACCAACTCG GCGTCGGGAT CGCCCTGGAC GACTTCGGTA CCGGGTTCTC CTCGCTGCAA
CACCTGCGGC GGCTACCGCT GTCCGAGGTG AAGGTGGACC GCTCGTTCGT CCTGGGGATG
ACGGAGGACG CCGACGACGC GGCGATCGTT ACCTCGGTGG TCGAACTGGC CCGGGCGCTG
GGTCTGCGGG TGGTGGCCGA GGGGGTGGAG GACGAGCGGA CCTGGCGGAT GCTGCACGCG
ACCGGCTGTG ACGCCGCGCA GGGCTGGTTC TACGCCCGGC CGATGCCGGC CGATGAGCTT
GTCGCCTGGC TGGCGCGGCA CCGCCCGGTG CGCCCGACGG TGGCCTCGGA CACCGCCGTC
AGGCGGCGAC CCGTCCGTTG A
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| Protein sequence | MATADPRNSV PPGRSAPFFA FVAVVLALAT LASVGPLLAL PDQVSRLPAA FWTMAVLAIA
CDARPFVPQG RRQSSAVFPS TCFTFAILLG WGLGPAVAVQ TVAVVVSGVR MGHASWRTAF
NAGQYACALA AAHLLIGLGP GDLFGGGQLG WTDVVVVGGA MLAWFVVNYG LVSSAVWLRF
GARWRPGLRQ GLGFELLSTG SLLLLAPVLV SAAQTSAALV PLVLVPLFAV YQMARLSVEQ
EQLASLDPLT GLPNRKALVA EVGEQLHRHA ERAADGSAPA RLALLLLDLD RFKHVNDALG
HAVGDRLLVE VSARLTEVVG PDLVARLGGD EFAVVLTGLT DVGEARRRAD RVVAALAEPV
TLDGLPLDVG GSIGVALFPD HGEDFATLMR HADVAMYDAK QRNDTVAVYA AESDHNSAER
LGLLADLRQV LASGLGQSAD GGGAGGDGAD GGGADQGRNG PALAAVPVVG GDGAALPRTD
AALPRTDAVG VGRWSLRGRR QRVHLVHSDE LIQRIVTAAD PIRRRTTVGS AGQPATGQAV
DHSIEPDRAP EVGGPVGHGA GQADPGGAGE ITMYYQPQVA IATGEVVGVE ALLRWRHPRR
GMVDPEELIR VAEQSAVMRL LTFRVIDDVV AQLARWQAAG VGLRAAMNVS VRDLHTGEIA
DRIAERLARY GVPPQLLQVE ITEGALMADP RRVLATITRL HQLGVGIALD DFGTGFSSLQ
HLRRLPLSEV KVDRSFVLGM TEDADDAAIV TSVVELARAL GLRVVAEGVE DERTWRMLHA
TGCDAAQGWF YARPMPADEL VAWLARHRPV RPTVASDTAV RRRPVR
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