| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_0995 |
|---|
| Symbol | |
|---|
| ID | 5704677 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | + |
|---|
| Start bp | 1118420 |
|---|
| End bp | 1119034 |
|---|
| Gene Length | 615 bp |
|---|
| Protein Length | 204 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641270510 |
|---|
| Product | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase |
|---|
| Protein accession | YP_001535897 |
|---|
| Protein GI | 159036644 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0127] Xanthosine triphosphate pyrophosphatase |
|---|
| TIGRFAM ID | [TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.120872 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAGG TTTTGCTCGC CACCCGGAAC CGGAAGAAGC TCGTCGAGCT GCAACGCATC
CTCGACGGCG CCCTGGGCGC GCACCGGATC GCCCTGATCG GCCTCGACGA CGTCGAGGCG
TACCCGGAGC TGCCCGAGAC CGGGCTGACG TTCGGCGAGA ACGCGCTGAT CAAGGCGCGG
GAAGGGTGCC GGCGCACCGG GTTGCCCACC GTCGCCGACG ACTCCGGGCT TGCCGTGGAA
GCACTCAACG GCATGCCCGG CGTGTTCAGT GCCCGGTGGG CCGGCCGACA CGGCGACGAC
AACGCCAACC TGCAACTGGT CCTGGACCAG ATCGCCGATC TGCCGGACGA GCATCGGGGC
GCCTCGTTCG TCTGCACGGT GGCCCTGGTG CTGCCCGGCG GGAAGGAACA TCTGGTTGAC
GGCCGGCAGC CTGGTCAACT GCTGCGGGAG CCGCGTGGCG ACGGCGGTTT CGGCTACGAC
CCGATCTTCC GGGGCGACGG GCAGGACCGT ACGAACGCCG AGCTGACGCC GACGGAAAAG
GACGCGATCA GCCACCGCGG CAAGGCGTTG CGCGAACTGG CGAAGCTGAT CGCCAAGGTA
CTTCCGCCGG CCTGA
|
|---|
| Protein sequence | MNKVLLATRN RKKLVELQRI LDGALGAHRI ALIGLDDVEA YPELPETGLT FGENALIKAR
EGCRRTGLPT VADDSGLAVE ALNGMPGVFS ARWAGRHGDD NANLQLVLDQ IADLPDEHRG
ASFVCTVALV LPGGKEHLVD GRQPGQLLRE PRGDGGFGYD PIFRGDGQDR TNAELTPTEK
DAISHRGKAL RELAKLIAKV LPPA
|
|---|
| |