Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_0964 |
Symbol | |
ID | 5703633 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 1087007 |
End bp | 1087729 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641270480 |
Product | Ricin B lectin |
Protein accession | YP_001535867 |
Protein GI | 159036614 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0183712 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCTCCG CTGAACGCCC CGATCCGGCC GGCACCGTCT ACCGCCACGA TGTTGCCCGT TCCCGGCTCC CCCGCGATCC GCTGATGTGG GCGGCGGTCC TTATCGGCGC GGCCGGCCTC CTGGTCGGGG CTTTCTTCGT CCTCAGTCCC GGAGGCGGTG GTCCCGGGGG CAGCGGCAGC ACAGCGGTCC CGGCGGCCGC GACCCCGCCG ACTGCCGCAC CGACCCCGTC GGCGGAGCAA CCCGCCGCCC CGACCATCCC GGCGACCACG CCCCCGACCA CCGCCCCGAC CACGGTGCCG CCGCCCCAGC CCACCGGCCC CACGGTCTTC CGCCAGGTGG CGTCTGGCCG CTGCCTGGGC ATCGACGGGG ACGGCGAGAA GGCGGCCGCG AAACTCGTCG ACTGCACCGA CGATCCCCGG CAGCGATGGC TCGCCGACTC CATCGGCCCA GGCCTCGTGA CACTGGTCAA CCAGGCCTCG AACATGTGCC TCGACGTGGA AGGGCACAGC GCCGACGACG GGGCGAAACT ACAGCAGTAC CCCTGCCACG GCGAGGCCAA CCAGCAGTGG CGGCTGGTGC CCACCGCCGG CGGGTCGGTG CTGCTCGCGG CCCTGAACAG CGGCAGGTGC GCACACCCGG ACGCGGGTAG GCACGACGCC GGCACCGACA TCCGGCAGAT CACCTGTGTT GATGCCCCCG ACCAGCAGTG GCTGCTCGGC TGA
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Protein sequence | MPSAERPDPA GTVYRHDVAR SRLPRDPLMW AAVLIGAAGL LVGAFFVLSP GGGGPGGSGS TAVPAAATPP TAAPTPSAEQ PAAPTIPATT PPTTAPTTVP PPQPTGPTVF RQVASGRCLG IDGDGEKAAA KLVDCTDDPR QRWLADSIGP GLVTLVNQAS NMCLDVEGHS ADDGAKLQQY PCHGEANQQW RLVPTAGGSV LLAALNSGRC AHPDAGRHDA GTDIRQITCV DAPDQQWLLG
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