Gene Sare_0922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_0922 
Symbol 
ID5704930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp1038067 
End bp1038870 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content72% 
IMG OID641270441 
Product5'-methylthioadenosine phosphorylase 
Protein accessionYP_001535830 
Protein GI159036577 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0005] Purine nucleoside phosphorylase 
TIGRFAM ID[TIGR01694] 5'-deoxy-5'-methylthioadenosine phosphorylase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.824829 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTCCCA CAGCAGAACT CGCGGTGATC GGCGGATCGG GTCTGTACGC CCTACTCGAA 
GGCGCCACTG AGCATGTGGT CGACACCCCG TGGGGGCCGC CGTCCGACGC GATCACCATT
GCCGAGGTCG CCGGCCGGCG GCTGGCGTTC CTGCCCCGGC ACGGCCGGGA TCACCGGCAC
CCCCCGCACC GGATCCCCTA CCGCGCCAAC CTGTGGGCGC TGCGCTCGCT CGGGGTACGA
CAGGTGCTCG CCCCCTGTGC GGTCGGTGGC CTGCGCCCGG AGCTGGGCCC GGGCACGTTC
GTGGTGCCCG ACCAGCTGAT CGATCGCACC AGCGGTCGGG CGCAGACCTA CTACGACCGG
GGTGCGGTGC ACGTCTCCTT CGCCGACCCG TACTGCCCGG TCGGCCGTCG TACGCTGCTC
GCCGCCGGCG CGGAGCGGGA CGTGCCGGCG GTCGACGGCG GGACGGTGGT GGTCGTCGAG
GGCCCCCGTT TCTCCACCCG GGCCGAGTCG CGCTGGTTCA CCTCGATCGG CGGGACGGTG
GTCAACATGA CCGGCCACCC GGAGGCGGTA CTCGCCCGCG AACTGGCCCT CTGCTACTCG
TCGATCGCCT TGGTCACCGA CCACGACGCG GGCGTGCCGG GCGGTGGATC GGTGACCCAG
GAAGAGGTGT TCCGGGTCTT CGGTGAGAAC ACCAACCGGC TGCGTGAGCT GCTGTTCACC
GCAGTGGCCA CACTGCCGGT GGACCGCGAC TGCCCGTGCG GGCACGCACT GGACGGCATC
AAGCTACCCT TCGCGCTGCC CTGA
 
Protein sequence
MSPTAELAVI GGSGLYALLE GATEHVVDTP WGPPSDAITI AEVAGRRLAF LPRHGRDHRH 
PPHRIPYRAN LWALRSLGVR QVLAPCAVGG LRPELGPGTF VVPDQLIDRT SGRAQTYYDR
GAVHVSFADP YCPVGRRTLL AAGAERDVPA VDGGTVVVVE GPRFSTRAES RWFTSIGGTV
VNMTGHPEAV LARELALCYS SIALVTDHDA GVPGGGSVTQ EEVFRVFGEN TNRLRELLFT
AVATLPVDRD CPCGHALDGI KLPFALP