Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_0880 |
Symbol | |
ID | 5704236 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 989811 |
End bp | 990500 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641270399 |
Product | hypothetical protein |
Protein accession | YP_001535789 |
Protein GI | 159036536 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR03089] conserved hypothetical protein TIGR03089 |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0751009 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0154869 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGACA ACATTGCCCG GGTCCTCGCC GACGCGATCG CGCCCGACCC GACCCGACCG CTGCTGACCT GGTATGACGA CGCCACCGGC GAGCGCACCG AGCTCTCCGG CGCGACCTGC GCGAACTGGG TGGCCAAAAC CGCCAACCTG CTGGTGGACG GGGTGGGACT GGGGCCCGGC GACGTCGCCG GGGTACTCCT CCCCCCACAC TGGCAGACCG CCGCCGTGCT GCTTGGCTGC TGGTCGGCCG GCCTGACGGT GGCCGATGCA CCGGGTGACG TGGACGTCCT CTTCGTGGCC CCCGCCCGGC TGGCCGAGGC GGACCGGTGG TCGGCCGGGG ACCGCTACCT GCTCGCACTG GACCCGTTCG CCCGGCCGCT ACGCGAGGTA CCGCCGGGGT ACGGCGACTT CGCGTCCGAG GTACGCACGC ACGGCGACCA CTTCGGGGCG TACCCGCCGG ATGAACCGGC CCAGGCGGAG CTGGCCGCCC GGGCGGCGGC CCGCGCGGCG GACCTCGGGC TGAACCCCGA CACGCGTGTT CTGATCGACG TCGACCGCTA CCCGGACCCG GTTGACTGGC TGCTGGCCCC GCTGGCCGCG AGCGCCTCCA CGGTCCTGGT GGCGCACCCC GACCCCACCC GCCTCGGTGC CCGCGCCGAC GCCGAGCGGA CCACCCTCAC GCTGCCCTGA
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Protein sequence | MADNIARVLA DAIAPDPTRP LLTWYDDATG ERTELSGATC ANWVAKTANL LVDGVGLGPG DVAGVLLPPH WQTAAVLLGC WSAGLTVADA PGDVDVLFVA PARLAEADRW SAGDRYLLAL DPFARPLREV PPGYGDFASE VRTHGDHFGA YPPDEPAQAE LAARAAARAA DLGLNPDTRV LIDVDRYPDP VDWLLAPLAA SASTVLVAHP DPTRLGARAD AERTTLTLP
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