| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_0870 |
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| Symbol | |
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| ID | 5704535 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 972073 |
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| End bp | 974601 |
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| Gene Length | 2529 bp |
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| Protein Length | 842 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641270389 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_001535779 |
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| Protein GI | 159036526 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.141816 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGGTGA CCTCCACTCC GCAAGGCCGG TCGCGGGTCG AGGCACCCAG GCCGAAGCTG
GCCCTTGGGG TTACGGCGGC GGTGTTGGCA ACCGCTCTGG TAGCGGCCGT CGTGGGGCTC
GTCCTTCCGA GCGGTCTACC CAGCGACGAT CCCCTCGGCG GTCCCGCGCG CTTCGGGCTC
GCGGTCGCCG CGTTCGCGCT CGCGCACCTC GCCCGACTCC AGTTCCGGGC CGCGGCCGGC
GCGGTCAGCA TCACCTGGGG CGAGGCCGCG CTCGTCATCT GCCTTCACCA GGTGCCCGCC
ACCTGGATCC CGGCGGCCAC CCTCCTCGGT GTCGGGCTGG CCTGGTCGGG GATGTCGCTG
CTCGGCGCCA ACCGGCCACC GCTGGAGGTC GTCCGGATCG CGTCCTCGCT GACCGTCACG
ACGGCGTTGG CCGTGTCGGT CACCACCCTC CTGGGCCGGC CGCTGCTGGC GGCGCCGACC
CCGCCGCTCG TGCTCGCGGT GGTCGCGGGC GCGGTCACCT ACCTGCTCGC CAGCGCCTGG
CTCGGCGCGG TCAACGCCAC GTTGCATCAT GGCGTCCCGA TCGGTGTCCT GCTGCGCCCG
GCGCTGCGCG GCAAGCTGCT GATGTTCGTG GGCAACGTGG TGGTGGGCCT GGTCGTGGTT
GCCCTCATCG AGGTCGACCC ACGCTGGCTG TTGGTGCTCC CGCCGCCGCT GTGGCTGCTT
CAGCAGACCT ACCGCCACCG GCTTCGCGCC GACCGGGAGC GACGTTCCTG GCGCGCCTTC
GCCGAGGCGA CCGGCGCACT CAACAAGCTC GACGAACGGG GCGTGGCGAC GGCAGCGGTG
AGCGGCGCAC TGACCCTGTT CCAGGCCGAG TCGGTCACCG TGGATGTCGC GTACGGGGAC
GGCCGACGGC GTCGGTACTG GGGCGACGCG GCCGGCCAGC TGTTCGACCG GGAGGTCGGT
GCCCTCGACG CGACCGCGGG GGACGAACGC GATCTGGCCC GGTCACTCAC CGTCGGGACG
GCCGAGGTCG GCCACCTGCG CGTCCGGTTG CCCTGCGCGG TGCCACCCAC CGACCGGGAC
CGCGATGCGT TCGCCGCGTA CAGCGACGCG CTCGCCGCCG CCCTGCACGA CGCGGCGACC
CATCGGGAGC TGCGGAAGGT CGCCGCCCGA TCCTCGTACG AGGCGGTGGT CGACGCGCTG
ACCGGCCTGG TCAACCGGGC GGCCATGCTC AGCAAGGGAG ATCAGGCGCT GCGGCAGCTG
GCCCGCGACC GGCCGGTGGC GTTGCTGTTG CTGGACATCA ACCGGTTCAA GGAGGTCAAC
GACACCCTCG GGCATGCTGC CGGGGACCAG TTGCTCCGCC TGACCGCGGA CCGGCTGGGC
GGCCTGACCC ACGGCGGGGA CTTGCTGGGC CGGCTCGGCG GCGACGAGTT CGCCCTGCTG
CTGACGTCGG TTCCGGTGAT CGGTGACCGC ACCGCACCGT TGGCGTACAC GTTGCGCCAG
GCCCGGGAGA TCACCGAACG CCTCGCCGCG CCCACGGAGG TGGCGGGTGT CCGGATGTCC
GTGGAGGCGT CCGTCGGGGT GGTGGTCGCT GGTGCCGGCA CCGCCGACAT GGCGGAGTTG
CTGCGCCGGG CGGACATCGC GATGTACCAG GCGAAGGAGG GCAGCGGTAG CGTCGCCGCG
TACGACTCCA CGCGGGATGC CGCCAGCACC GACCGACTGG CTCTCCTGGC CGAGCTACGC
GAGGCGCTGG CCGCCGACGA CCAACTGGTG CTGGTCCTGC AACCGGCGGT GGACCTGGCC
ACCGGCGCAC CGACCGGAGT GGAGGCGCTG ATCCGGTGGC GCCATCCCCG GCGTGGTTGG
CTGAACCCGC ACGAGTTCAT TCGTCCCGTG GAAAACAGTG AGCAGCTGGG CACTTTCACC
CGGTACGTGC TGGACAAGGC GCTCGGGCTG GCAGCGCAGT GGGCTCGGGA CGGCCTGGAC
CTGCCGATCT CGGTGAATCT TTCCGCCCGC AGCCTGCTCG ACCCCCGGCT GCCGGCAGAG
ATCGCGGAGG CGCTGCGTCG CCACCAGGTG CCGGCGCGGC GCCTGGTGCT GGAGATTACC
GAGACCGTGG TGATGAGCGA GCTCGAGGTG ATCGATGAGG TGCTCGGCAC ACTACGCACG
ATGGGGGTGC AGTTGGCCGT CGACGACTTC GGCACCGGTT TCTCGTCGCT GACCTTCCTC
ACCCGGATCG CCGTGGACGA GTTGAAGGTG GATCGCTCCT TCGTGATCCG GATGGCCGAT
TCGCCGGAGG CGGCGGCGAT CGTGCGCACC ACCGTGGGGC TCGCCCAGCA GCTGGGGCTA
CGGGTGGTCG CCGAGGGCGT GGAGACCGCC GAACAGCGGA GCGCGCTGGC CGAGCTCGGT
TGTACGGCCG CGCAGGGCTA CCTGTTCTTC AAGCCGATGC CGGCTGACAA GATCGGAGCC
GTTCTCGGTG GCCTGGTCGA CCAGGCGCGT CCCCGGATCG TCCCGCTCCG TGCCGACGGC
GCCTCCTGA
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| Protein sequence | MAVTSTPQGR SRVEAPRPKL ALGVTAAVLA TALVAAVVGL VLPSGLPSDD PLGGPARFGL
AVAAFALAHL ARLQFRAAAG AVSITWGEAA LVICLHQVPA TWIPAATLLG VGLAWSGMSL
LGANRPPLEV VRIASSLTVT TALAVSVTTL LGRPLLAAPT PPLVLAVVAG AVTYLLASAW
LGAVNATLHH GVPIGVLLRP ALRGKLLMFV GNVVVGLVVV ALIEVDPRWL LVLPPPLWLL
QQTYRHRLRA DRERRSWRAF AEATGALNKL DERGVATAAV SGALTLFQAE SVTVDVAYGD
GRRRRYWGDA AGQLFDREVG ALDATAGDER DLARSLTVGT AEVGHLRVRL PCAVPPTDRD
RDAFAAYSDA LAAALHDAAT HRELRKVAAR SSYEAVVDAL TGLVNRAAML SKGDQALRQL
ARDRPVALLL LDINRFKEVN DTLGHAAGDQ LLRLTADRLG GLTHGGDLLG RLGGDEFALL
LTSVPVIGDR TAPLAYTLRQ AREITERLAA PTEVAGVRMS VEASVGVVVA GAGTADMAEL
LRRADIAMYQ AKEGSGSVAA YDSTRDAAST DRLALLAELR EALAADDQLV LVLQPAVDLA
TGAPTGVEAL IRWRHPRRGW LNPHEFIRPV ENSEQLGTFT RYVLDKALGL AAQWARDGLD
LPISVNLSAR SLLDPRLPAE IAEALRRHQV PARRLVLEIT ETVVMSELEV IDEVLGTLRT
MGVQLAVDDF GTGFSSLTFL TRIAVDELKV DRSFVIRMAD SPEAAAIVRT TVGLAQQLGL
RVVAEGVETA EQRSALAELG CTAAQGYLFF KPMPADKIGA VLGGLVDQAR PRIVPLRADG
AS
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