Gene Sare_0691 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_0691 
Symbol 
ID5708251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp763673 
End bp765901 
Gene Length2229 bp 
Protein Length742 aa 
Translation table11 
GC content74% 
IMG OID641270209 
Productdiguanylate cyclase with GAF sensor 
Protein accessionYP_001535602 
Protein GI159036349 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACACTAC GGGCACGCCT AACCACAGCC CTTCTCACGG TGGTGCTCGG CCCGGTGCTG 
GTCGGAGCGT ACTTCGTGGG ATCGGCCGTG GCCGCCGTCG ATCGCAGCCG GTCCACCGAG
CGGCTCGCGG TCGCCGCGAC CGCCGTCCGA GCCTCGGTCG ACGCACTCTG CCAACAGCTG
AGGGCCGCCG CGGACGCGGT GGCCCTCGCC GACGACCGGG CGGCCGTCGC CGGTCAGGTA
GTCGGTCGAG GGCTGGCCGC CGCCGTGCGG GTTACCGATG TTGCCGGGAA GGTGACCCAC
GCCACCGGTC AGTCGCCCAC CGCCCCCTGG CGGGACTGCT CGGCACGTAC CCCGGTCGAC
GTTGCGCCGG GCGCGTTGGC CGTCCGGGTG GATCTGTGGG ACGCCACTGG CGTCCCACAG
GGCACGGTCA CCACCGCGCA GCCGGTCGAC CCGGCGTTCA TGGCACGGCT GGCGGGGGTC
ACCGGGGCGG CCGTCACCCT GCTGGGTGGC CCGGACGCGG CCAGCCGGCC ACGGCATACC
ACCGAGCCGG CGGGAGTACA CGAGGCCGTG CTCGCCGCCG CTGGCGGGTT GGATGGTGAG
CGGGTGGTGG GCACCGCCGA CGGTCGGTAC GTGCGCCGGG TCGGCCCGTC AGACGGACAG
CCCCTGCCGC TGGTGTTGTC CGTCCCCAGC GACCGGCCTC CCGGCCTCTA CGCCGTCCTG
GTCGCCGCGG TGCTGTTGGT CACCCTGCTG GCGGTGATCG TCGCCGGGCG GCTGGCCCGG
GTCACCACCC GGCCGCTGGT CGAACTGGTG AAGGCGGTCG ATCGGGTGGC TCGCGGCGAC
CTGACGGCGC GGGTGCCGGT GCGTAGCCGG GACGAGGTCG GGCGGCTGGC CGATGCGTTC
AACCGGATGA CCCGGGAGAC CGGCACCTAC GTCACGGCGT TGACCAGTAG CCGGGACCAG
CTGCGCGGGC ACCTGGCGGT GCTTGGGGAC ACCCTGGCCA GCACGCATGA CCTGCAGCGC
ATCCTGCGGC TCATCCTGCA CAGCGCGATC GCCGCGACCG GTGCCCGGGC CGGGGCGGTG
CTGCTCGTCG AGCCAGGAGG GCAGCTGGTC GCTCAGGCCA CCGAAGGGAT CGAGGCGCCA
GCCTCCGGGA GCGGGCCGAT CCGGGTACCG CTGGGCGATC TGGTCGGCGC GGTCACGGTC
AGCGGCGAGT CGCGCCGTGG TCGGGTGGAA CCGTCCGGGG TACCACCGGG GGAGCCCCGT
TGCCGGACGT ACGTCGCGGT GCCCTTCGCG GCCCCACGCG ACGTCGGTCC CGCGCGGGGC
GACGGCCCGG CTGCCCGCCC GGGTGGTCCG CCGGACGGCG CCGCACCGGC AACGTTCGGC
GTACTCGCCC TCTACGACCG GCTCGGTGGG GACGACTTCG ACGACGACGA TCTGGTCACG
CTGCGCACCT TCGCTGGGCA CGCCGCGGTG GCGGTGGACA ACGTACGGGT GCACGAGGAA
GCCCAGCGAC TGTCCCTGAC CGACCCGCTC ACCGGTCTCT GGAACTACCG CTACCTACGC
CAGTCACTTC GCCGCGAGGT GGAGCGGGCA ACCCGCTTCG GTCGAATGCT CAGCGTCCTC
GTCCTCGACC TTGATCGCTT CAAGCACATC AACGACACTC ACGGGCACAC CGCCGGGGAC
CTGGTGCTGG TCGAGTTCGC CCGCCGAATG CGTGGCGAGA TCCGTGAGGT CGACCTCGCC
TTCCGGCAGG GAGGCGAGGA GTTCGTCGTG CTGCTACCGG AGACCGACGC CCTGGGAGCG
GCCATCGTCG CCGGACGGCT CGGTGCGGCG GTACGGGGCA CCCCGATCGC CGTCGGTGGG
TTGGGTGAGC CGGTCCTGGT GCCGGTGACC GTCTCCATCG GTGTCGCCGT CCACCCCGAC
CATGGCGGCA CGGGACAGGA AGTGCTCGAC GCCGCGGACG AGGCGTTGTA CGCGGCGAAG
GCCAGCGGGC GGGACACCTG GCGGATCGCC GGGATGGCCG GGGCCGCCAC ACCCGCATTG
GAACTCCCGG TGTCGGCCGG CTCGGCGGAG GGGCTGCCCC GAGCCGGCGC GCGGCGTGAG
GCACCGGATG GACCACGTGC GACCCGCGGG AACGGACCGG AGACCGATCC CCTACCGGGC
TCTGGGACGG CCGCGCCCGA CGGCCCGACT TCCGGTCCTC ACCCGCCACG GCAGAGCCGT
GGCCGATAG
 
Protein sequence
MTLRARLTTA LLTVVLGPVL VGAYFVGSAV AAVDRSRSTE RLAVAATAVR ASVDALCQQL 
RAAADAVALA DDRAAVAGQV VGRGLAAAVR VTDVAGKVTH ATGQSPTAPW RDCSARTPVD
VAPGALAVRV DLWDATGVPQ GTVTTAQPVD PAFMARLAGV TGAAVTLLGG PDAASRPRHT
TEPAGVHEAV LAAAGGLDGE RVVGTADGRY VRRVGPSDGQ PLPLVLSVPS DRPPGLYAVL
VAAVLLVTLL AVIVAGRLAR VTTRPLVELV KAVDRVARGD LTARVPVRSR DEVGRLADAF
NRMTRETGTY VTALTSSRDQ LRGHLAVLGD TLASTHDLQR ILRLILHSAI AATGARAGAV
LLVEPGGQLV AQATEGIEAP ASGSGPIRVP LGDLVGAVTV SGESRRGRVE PSGVPPGEPR
CRTYVAVPFA APRDVGPARG DGPAARPGGP PDGAAPATFG VLALYDRLGG DDFDDDDLVT
LRTFAGHAAV AVDNVRVHEE AQRLSLTDPL TGLWNYRYLR QSLRREVERA TRFGRMLSVL
VLDLDRFKHI NDTHGHTAGD LVLVEFARRM RGEIREVDLA FRQGGEEFVV LLPETDALGA
AIVAGRLGAA VRGTPIAVGG LGEPVLVPVT VSIGVAVHPD HGGTGQEVLD AADEALYAAK
ASGRDTWRIA GMAGAATPAL ELPVSAGSAE GLPRAGARRE APDGPRATRG NGPETDPLPG
SGTAAPDGPT SGPHPPRQSR GR