Gene Sare_0678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_0678 
Symbol 
ID5704351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand+ 
Start bp755852 
End bp756475 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content69% 
IMG OID641270197 
ProducttRNA/rRNA methyltransferase (SpoU) 
Protein accessionYP_001535590 
Protein GI159036337 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.435122 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.171519 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTGGTG AGCAGTGTGA CGTCGGGGTC GGGCCGTGGC AGGGCGCTCC ACCCGACGAT 
CCGCGGTACG ACCCAGACCT GCTCGCTCAC GGTGACCGCC GCAACGTCGT CGACCGGTAC 
CGTTACTGGC GGCACGAGGC CGTCGTCGCG GACCTGGACC AGCGGCGGCA CGAGTTCCAT 
GTGGCGATCG AGAACTGGCG ACACGACCTG AACATCGGCA CCGTCGTCCG CAACGCCAAC 
GCGTTCCTCG CCGCCGAGGT CCACATTGTC GGCCGTCGCC GGTGGAACCG GCGTGGCGCG 
ATGGTGACCG ACCGCTACCA GCATGTCCGG CACCACGAGA CGATCGAGGG CTTCGTCGCC 
TGGGCGGCCG GTGCCGGGCT CTCGGTGGTG GGCATCGACA ATCTTCCTGG CTCCCGGCCG 
CTGGAGACGA CCACGTTGCC CCGGCGGTGC GTGTTGCTCT TTGGCCAGGA GGGGCCGGGA 
CTCTCCGCCC CCGCCCGGGC GGCCTGCGAC CAACTCTTCT CGATTGCGCA GTACGGTTCG 
ACCCGTTCGA TCAACGCCGG TGTGGCCAGT GGGATCGCCA TGCATGCCTG GATCCGGTCG 
TATGGCGGGC CGGCGCCGGA CTGA
 
Protein sequence
MTGEQCDVGV GPWQGAPPDD PRYDPDLLAH GDRRNVVDRY RYWRHEAVVA DLDQRRHEFH 
VAIENWRHDL NIGTVVRNAN AFLAAEVHIV GRRRWNRRGA MVTDRYQHVR HHETIEGFVA 
WAAGAGLSVV GIDNLPGSRP LETTTLPRRC VLLFGQEGPG LSAPARAACD QLFSIAQYGS 
TRSINAGVAS GIAMHAWIRS YGGPAPD