| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_0645 |
|---|
| Symbol | |
|---|
| ID | 5707844 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 726206 |
|---|
| End bp | 727240 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641270165 |
|---|
| Product | thiamine pyrophosphate binding domain-containing protein |
|---|
| Protein accession | YP_001535558 |
|---|
| Protein GI | 159036305 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.159967 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.000875806 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGAGC CCGTCGCCCT CAAGCTCACC GCGAAGGACT TCAAGTCCAG CCAGGAGGTG
CGGTGGTGCC CCGGCTGCGG TGACTACGCG ATCCTCGCCG CCGTCCAGGG CTTCATGCCG
GAGCTGAACA TCCCCCGGGA ACGGATCGTC TTCATCTCTG GAATCGGCTG CTCCTCGCGC
TTCCCGTACT ACATGAACAC GTACGGGATG CACTCGATCC ACGGCCGCGC CCCAGCGATC
GCCACCGGGT TGTCCGCCAC CCGCCCCGAC CTGTCCGTCT GGGTGGTCAC CGGAGACGGC
GACGCGCTGT CGATCGGTGG CAACCACCTG ATCCACGCGC TACGGCGCAA CGTCAACCTG
AAGATCCTCC TGTTCAACAA CCGGATCTAC GGTCTGACCA AGGGCCAGTA CTCACCGACG
TCCGAAGTTG GCAAGATCAC CAAGTCGACT CCGGTGGGCT CTGCGGACGC CCCGTTCAAC
CCGCTTTCGC TGGCACTGGG TGCGGAGGCG ACCTTCGTGG CCCGCACCAT CGACTCGGAC
CGCAAACACC TGCAGTCGGT GCTTCGGGCC GCCGCCGAGC ATGAGGGCTC CGCGTTCGTG
GAGATCTACC AGAACTGCAA CATCTTCAAC GACGGAGCGT TCGACCAGCT CAAGGAGCCC
GCCACCCGGG ACGACTCACT GATCCGGTTG GAGCACGACC AGCCGATCAC GTTTGGCCGG
GACGGACAGT TCTGCGTCGT GCACCCGCCT GGCGGCTTCG GCCTGGAGGT CCGCGAAACC
GCGGGCACCG CACCGGAGGA GATCGTGGTC CACGACACCA CCGTCACCGA CCCGGCGTAC
GCGTTCGCCC TGTCCCGGCT GCCGGGTCTG GACCTGCGCA ACACCCCGAT CGGCGTGTTC
CGTTCGGTAC GGCGGCCCTC GTACGACAGC GTGGTACAGG AACAACTCGA CGCCGCCCGG
GCGACCGTGA CCGAGAGCCG CGAGCAGCAG TTCGCCGGGC TGTTGAACAG CGGCGACACC
TGGACGATCA GCTGA
|
|---|
| Protein sequence | MSEPVALKLT AKDFKSSQEV RWCPGCGDYA ILAAVQGFMP ELNIPRERIV FISGIGCSSR
FPYYMNTYGM HSIHGRAPAI ATGLSATRPD LSVWVVTGDG DALSIGGNHL IHALRRNVNL
KILLFNNRIY GLTKGQYSPT SEVGKITKST PVGSADAPFN PLSLALGAEA TFVARTIDSD
RKHLQSVLRA AAEHEGSAFV EIYQNCNIFN DGAFDQLKEP ATRDDSLIRL EHDQPITFGR
DGQFCVVHPP GGFGLEVRET AGTAPEEIVV HDTTVTDPAY AFALSRLPGL DLRNTPIGVF
RSVRRPSYDS VVQEQLDAAR ATVTESREQQ FAGLLNSGDT WTIS
|
|---|
| |