Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_0460 |
Symbol | |
ID | 5705457 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 528644 |
End bp | 530146 |
Gene Length | 1503 bp |
Protein Length | 500 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641269985 |
Product | pyridoxal-dependent decarboxylase |
Protein accession | YP_001535380 |
Protein GI | 159036127 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000172466 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATCGACG AAGATGGGTT GCCCGTGCGC GGGCTGCCGG CCGAGCGGGT CCTCGAGGAA GTCCGGGCGC TGCGCGCCGG GGACCGGCCG ACCCACGGCG GTCGACTGTT CGCGTTGGTG TTCGATCCGG CAGTGCCCGG GCTGGACGCG CTGACCGCCT CCGCGCACGC GGAGAGCGCG CACGTCAACG GGCTTGACCC GACCGCCTTC CCGTCCCTGG TCGCCATGGA GAACGCGCTG GTCGGTGCCG CTGCCCGCCT GCTCGGTGGC GGGCCCGGCA CCGATGCACC GGAGGTGGTC GGCGCGGTCA CCAGCGGGGG CACCGAGTCG CTGATCCTGG CGGTGAAGAC GGCCCGTGAC GCCCATCCCG AGATCGCCGA ACCCCGGATC GTGGTGCCGG CCACCGCGCA CGCCGCGTTC GCCAAGGCTG GCCACTACCT GCGGGTGGCC GTCGACATGG TGCCGGTGTC GGCGGAGACC CTGCGCCCCG ATCCGGCCGC CGTCGCCGCC GCGATCCGCC CGGAAACCGT GCTGGTCGGG GCCTCAGCCC CGGGATACGC ACACGGCGTC ATCGACCCCG TCGCCGAGAT CGCGGCGGTC GCCGCCGATG CCGGGGTGCG CTGCCACGTG GACGCGTGCT TCGGCGGATG GACCCTGCCC TGGCTGCGTC GCCTCGGTGA ACCGGTGCCG GCGTTCGACT TCGCCCTACC CGGTGTCACC TCGATCTCGG TGGACCTGCA CAAGTACGCG TACGCCCCGA AGGGCGTGTC GATCCTGCTG CACCGTGACC CGGAGCTGCG GAAGCCGCAG TACTTCGCGC ACGCCGACTG GCCCGGCTAC ACAATGATCA ATCCGGTGAT CGCCTCCACC CGTTCCGGTG GACCCATCGC CGCCGCGTAC GCGACCCTTC GGCACCTGGG CGAGGACGGG TACCTACGGC TGGCGGCGGC GACCCGGGAC GCGGTGAACG GGCTGGCCGA CGCCGTCCGG GCCACTCCCG GGCTGCGGTT GCTGGCCGAA CCCGAGTCGA CCGTGATCTG TGTTGCCGCG ACCGACCCGG AGCTGGATCT GTTCGTGCTC GTGGACGAGT TGGACGCGCG CGGCTGGCAC ACCCAACCGC AGCTCGCCTA CGCCGGCCTG CCCCGTAACG TGCACCTGTC GGTGACCGCG TCGGTGGCGC CGCTGGTAGC CGGCTTCGGC GCCGACCTGG CCGACGCCGT TGCGGCGACC CGGGCGGCCG GGCCGGTCCG ACTTCCCGTG GAACTGCTCG CGCTCGCCCG GTCCCTGACC CCGGAAGGGC TGACCCCGGA CCGGGTCGCC GGCCTGACCG CCGGTCTCGG CGTCGGATCG GGCGACGCGG CGGACGACGC TTCCCCCGCC CTGGTGCCGT CCCGGATGGC CGTGGTGAAC ACTCTGCTCG AAGCGGCGCC AGCGGCGCTG CGGGAGCGCC TGCTGGTGGA GTTCGTCGGG CTGATGCAGC GTCCCACCTG GTCGCGACAT TGA
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Protein sequence | MIDEDGLPVR GLPAERVLEE VRALRAGDRP THGGRLFALV FDPAVPGLDA LTASAHAESA HVNGLDPTAF PSLVAMENAL VGAAARLLGG GPGTDAPEVV GAVTSGGTES LILAVKTARD AHPEIAEPRI VVPATAHAAF AKAGHYLRVA VDMVPVSAET LRPDPAAVAA AIRPETVLVG ASAPGYAHGV IDPVAEIAAV AADAGVRCHV DACFGGWTLP WLRRLGEPVP AFDFALPGVT SISVDLHKYA YAPKGVSILL HRDPELRKPQ YFAHADWPGY TMINPVIAST RSGGPIAAAY ATLRHLGEDG YLRLAAATRD AVNGLADAVR ATPGLRLLAE PESTVICVAA TDPELDLFVL VDELDARGWH TQPQLAYAGL PRNVHLSVTA SVAPLVAGFG ADLADAVAAT RAAGPVRLPV ELLALARSLT PEGLTPDRVA GLTAGLGVGS GDAADDASPA LVPSRMAVVN TLLEAAPAAL RERLLVEFVG LMQRPTWSRH
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