| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_0426 |
|---|
| Symbol | hemA |
|---|
| ID | 5708403 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | + |
|---|
| Start bp | 486568 |
|---|
| End bp | 487935 |
|---|
| Gene Length | 1368 bp |
|---|
| Protein Length | 455 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641269951 |
|---|
| Product | glutamyl-tRNA reductase |
|---|
| Protein accession | YP_001535346 |
|---|
| Protein GI | 159036093 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0373] Glutamyl-tRNA reductase |
|---|
| TIGRFAM ID | [TIGR01035] glutamyl-tRNA reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.998007 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.00912158 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGAAACTGC TAGTTGTCGG CGCGTCTTAC CGCACCGCAC CGGTCGCCGC CCTGGAACGA
CTCGCGGTCG CCCCCGCCGA CCTTCCCCAT GCCCTGGCCC GCCTGGTCGC GCAGCCGTAC
GTGAGTGAGG CCGTGCTCGT CTCCACCTGT AACCGGGTGG AGGTGTATGC CGCCGTGTCG
GGCTTCCACG GTGGCCTTGG CGACATCTGC GCCGTCCTGG CGGAGTCGAC CGGCGTCCCG
CCGGCGGCCC TCGCGGACCA TCTGTACGTG CACTTCGACG CCGCGGCGGT CAAGCATGCC
TTCCGGGTCG CCACCGGGCT GGACTCCATG GTCGTCGGTG AGGCCCAGAT TCTCGGCCAG
CTCCGGGACG CGTACCACTG GGCGTCCGGT GCGGACACCA CGGGCCGACT GCTGCACGAG
TTGATGCAGC AGGCGCTGCG GGTGGGTAAA CGCGCCCACT CCGAGACCGG TATCGACCGA
GCCGGGCAGA GTGTCGTCAC CGCCGCGCTC GGTCTCGCCA CCGAGTTGCT CAACAGCGAC
CTGGCCGCCC GCCCGGCGCT GGTCGTCGGG GCGGGAGCGA TGGGATCGCT CGGTGTGGCC
ACCCTCTCCC GGCTGGGCGC CGGCCCGGTC GCCGTGACCA ACCGGGGTGC CGACCGCGCC
GTCCGGCTGG CCGAGTCGTA CGGCGCGACC GCCGTACCGA TCGCCGACCT CACCGCAACG
CTTTCCACAG TGGATATCGT AGTGGCCGCC ACCGCGGCCC CCGAGGCGGT CCTCACCCGC
GAGGTGGTGA CCCGGGCACT CGCTGACCGG AAGCCGTCCC GTGGCCCGCT GGTGCTGCTC
GACCTGGCCG TCCCGCGGGA CGTCGAGCCC GGCGTCGCCG ACCTTCCCGG CGTGCAGGTC
ATCGACATTG ATCGGATGGC GGCGCTGGTC GCCAACGGTC CCGCCGCCGC TGACGCCGCC
GCCGTGGAAC GGATCGTCGC CACCGAGGTC GACGCCTTCC TCAACTGGCT GCGCGGCGCC
GACGTCGCAC CGACCGTGGC AGCCCTGCGG GGGCGCGCCG ACAACGTGGT CACCGTCGAG
CTGGGCCGGC TGGCCCAGCG TCGCCCCGAC CTGACCGACG ACCAGCGGGA CGAGGTCGCC
CGGACCGTAC ACCGGGTCGT TCAACGTCTG CTGCACCAGC CGACCGTGCG GGTTCGCCAG
CTCGCCGCCG AGCCCGGCGG CGACCAGTAC GCGGCACTGC TCCGCGAGCT GTTCGATCTG
GAGGTGCCGC AGACCTCCCC GGTCGGCACC GTCCCCGAGG TGGTGGTACC CGAAGCCGTC
CCCCCGCTCG GCGGCGCCGC CGAGGATCCA TCCACCGGAG GTCAGTGA
|
|---|
| Protein sequence | MKLLVVGASY RTAPVAALER LAVAPADLPH ALARLVAQPY VSEAVLVSTC NRVEVYAAVS
GFHGGLGDIC AVLAESTGVP PAALADHLYV HFDAAAVKHA FRVATGLDSM VVGEAQILGQ
LRDAYHWASG ADTTGRLLHE LMQQALRVGK RAHSETGIDR AGQSVVTAAL GLATELLNSD
LAARPALVVG AGAMGSLGVA TLSRLGAGPV AVTNRGADRA VRLAESYGAT AVPIADLTAT
LSTVDIVVAA TAAPEAVLTR EVVTRALADR KPSRGPLVLL DLAVPRDVEP GVADLPGVQV
IDIDRMAALV ANGPAAADAA AVERIVATEV DAFLNWLRGA DVAPTVAALR GRADNVVTVE
LGRLAQRRPD LTDDQRDEVA RTVHRVVQRL LHQPTVRVRQ LAAEPGGDQY AALLRELFDL
EVPQTSPVGT VPEVVVPEAV PPLGGAAEDP STGGQ
|
|---|
| |