| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_0371 |
|---|
| Symbol | |
|---|
| ID | 5704422 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | + |
|---|
| Start bp | 433646 |
|---|
| End bp | 434416 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641269896 |
|---|
| Product | beta-lactamase domain-containing protein |
|---|
| Protein accession | YP_001535291 |
|---|
| Protein GI | 159036038 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.677057 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0150173 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGGCG AGAATCTTCA GTTCACGGTT CTGGGTTGTG CGACGCCTTA TCCGAGTGTG
GACAATCCCT GTTCCGGCTA CCTGGTGTCG GGTGGGGGCG CCCGGGTGTG GGTGGACGCG
GGCAGTGGGA CGCTGGCTCA GCTGCAACGA CATGTCCGGC TGGACGAACT GGACGCGATC
TGGGTCTCGC ACCTGCACGC TGATCACAGC GCCGACCTCC TGACCGCCTA CTACGGGGCG
CTGTACGCCG ATATCCAGCT CGCGGCTCCG ATCCCGCTGT ACGGCCCGCC CGGCATCGCC
GACCGATTGG CGCACTTCCT GACCAACACC GCGACCCGCA GCCCGATCGA ATCCGCCTTC
GCCGTCGAAG AGCTACACGA CGGGCACCGG GTGGCGGTCG GCGCGCTGAC GTTGACCAGT
CATGCGGTGG CGCACGGTAT TCCCGCTTTC GCTCTGCGTG TCGATGTTGG GGGGCGGTCG
TTGGCGTACT CCGGGGACAC GGCCCCCTGT CCTGGCCTGA CGAGTCTGGC CAGGGGCTGC
GATGTGCTGC TGTGTGAGGC CGAGAGCGCG CAGGCCCCGA GCAAGGGGGA ACGGGTTCAC
CACACACCGG AGGATGCCGG TGACACTGCT CGCGTGGCCG AGGCAAGGCG CTTGATCGTT
ACACACATCG GGCGGTTCCT CACCCCGCAG CAGGCGGTGG CACGCGCCTC GACCCGGTTT
GACGGTCCCA TCGACTTCGC CGCCCCCGGT GCCACCCATT CGATCGACTG A
|
|---|
| Protein sequence | MSGENLQFTV LGCATPYPSV DNPCSGYLVS GGGARVWVDA GSGTLAQLQR HVRLDELDAI
WVSHLHADHS ADLLTAYYGA LYADIQLAAP IPLYGPPGIA DRLAHFLTNT ATRSPIESAF
AVEELHDGHR VAVGALTLTS HAVAHGIPAF ALRVDVGGRS LAYSGDTAPC PGLTSLARGC
DVLLCEAESA QAPSKGERVH HTPEDAGDTA RVAEARRLIV THIGRFLTPQ QAVARASTRF
DGPIDFAAPG ATHSID
|
|---|
| |