| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_0347 |
|---|
| Symbol | |
|---|
| ID | 5708019 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | + |
|---|
| Start bp | 386471 |
|---|
| End bp | 387451 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641269873 |
|---|
| Product | secreted protein |
|---|
| Protein accession | YP_001535268 |
|---|
| Protein GI | 159036015 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0100122 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCGAC GATCGATCCA GCGGATCGGC ATGGCCCTGC TCGCCGCCGC CGCGGTGAGC
CTCACCCTGT CCACCCCGAC AGCCGCCAAG CCCGATGCGG GCACGCCGAT GCAGTGGCGA
GAGGTCTTCT CACCCGACGG CACGATCACC AAGATGTATC TGCCCCGGGA GCAGACCGCA
ACCCAGCTCG CCCCAGCCGA TGTCGTCGCC CAGGCGGACG TGGTCACCAT CCAGTACAGC
GGGCTGTCCA GTCAGCGTTT CGACATGGTG TTCATCGGCG ATGGCTACAC CGCCACCGAG
ATGGACACCT TGCGCAAGCA CGCGCAGGCA AAATGGGACG AGATCGCCGC CAGCGCCCCG
TGGAACAAGT ACAAGAGCTT CATCAACGTG TGGCTGGTCA ACGTCATCTC CAACGAGTCC
GGCGTCGACA ACGACCCATC CCCGGGCGTC AACCGCGACA CTGCGCTGGA CATGTACCTC
TGGTGTAACA ACATCGAACG CCTGCTCTGC CTGAACGAGG CCAAGGCCCG GCAGTACGCC
AACCAGGCCC CTGGCGTCGA CGCGATCGTC GCCGTCGGCA ACACCGCCAA GTACGGTGGC
GCCGGGTACC GCGACCTGTC CACGGTCTCC GGCGCCAACG TCCTGTCCGG CCAGATCGCG
CTCCACGAAC TCGGCCACTC GGTCGGCGGC CTCGCCGACG AGTACTACAC CCCCGGCACC
ACCTACAGCG GCGGCGAGCT GCTGGCGCCC AACGCCACCA CCGACTCCAC CGGCCAGAAG
TGGGCCTCCT ACCTTGGCCG TTCTACTCCC GATGGCGGTG TTATCGGCGC CTACCAGGGC
GGTGAACAGT ACGAGTACGG CATATACCGG CCGTCGCAGG ACTCCCTGAT GCGCAGCCTC
AACAAGCCGT TCAACCTCGT GGGCCTGGAC GTGATGGACC GCGCGATCAG CGCCAAGATC
AGTGGTGGTT CGACAGGCTG A
|
|---|
| Protein sequence | MRRRSIQRIG MALLAAAAVS LTLSTPTAAK PDAGTPMQWR EVFSPDGTIT KMYLPREQTA
TQLAPADVVA QADVVTIQYS GLSSQRFDMV FIGDGYTATE MDTLRKHAQA KWDEIAASAP
WNKYKSFINV WLVNVISNES GVDNDPSPGV NRDTALDMYL WCNNIERLLC LNEAKARQYA
NQAPGVDAIV AVGNTAKYGG AGYRDLSTVS GANVLSGQIA LHELGHSVGG LADEYYTPGT
TYSGGELLAP NATTDSTGQK WASYLGRSTP DGGVIGAYQG GEQYEYGIYR PSQDSLMRSL
NKPFNLVGLD VMDRAISAKI SGGSTG
|
|---|
| |