Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_0287 |
Symbol | |
ID | 5705260 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 320761 |
End bp | 321723 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 641269814 |
Product | ROK family protein |
Protein accession | YP_001535209 |
Protein GI | 159035956 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1940] Transcriptional regulator/sugar kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.490636 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGGCCACG CAGCCACGAC CAGTGCGGCG GACCGTGAGG TCGTCGTCGC ACTCGACGTC GGCGGCAGCG GGATGAAGTG CGCCCTGGTC CGCCGGGACG GCACGGTCAC GCACACCGAA CACCACCTGA CCGGCGCCGC GCGCGGTCCG GCCGCGGTGA TCGACACCAT CCTGGACGTC GCCGAGGCCC TGGCCGACAC GGCCCGCCGG GAAGGACTCG CCCCGGTGGC CCTCGGCCTC GCCGTCCCGG GCGTCATCGA CGAGGCGCAG GGCGTGGCTA TCTGGTCGGC GAACATCGGC TTCCGCGACG TACCCCTACG GAAGCTGGCT GCGGCGCGGC TGGGGATGCC GGCGGCGCTC GGCCACGACG TACGCGTCGG CGGCCTCGCC GAGGCACGGC TCGGAGCCGG CCGCTCCGCC CGGCACGTCC TCTTCGTCGC CATCGGCACC GGCATTGCCG CCGCCCATGT GATCGATGGC GCGGCGGCGG CCGGCGCGCA CGGCGCTGCC GGGGAGCTCG GCCACGTCCT GGTCCGTCCC GGCGGCCCAC GGTGCGGCTG CGGGCGCGAC GGATGCCTGG AGGCGGTCGC GTCCGCCTCG GCGGTCGCCC GCCGCTACGC GGAGCTGGCC AGCACCGCCC CCGACGCACC GGAGGCGAGC GCGGCCGAGG TGGCCACCCG CGCCGCCGCC GGTGATCCGC TGGCCCAGCA GGTCTGGACG GACGCGGTCG AGGCACTCGC CGACGGCCTC GCCACCGGCC AGGCCCTCTT CGACGTGGAG GCGGTCGTCC TGGGCGGCGG GCTGGCCCGA GCCGGCGCCC AGCTGCTCGA CCCGCTGCGG GCCGCGCTGC ACGATCGGAT GACCTTCCAC CGCGAGCCAC GGCTGGTCCC GGCGGCCCTC GGCGCCGAGG CTGGCTGCCT TGGCGCCGCC CTGCTCGCCC TCGACGACCT GGAGAAGCCA TGA
|
Protein sequence | MGHAATTSAA DREVVVALDV GGSGMKCALV RRDGTVTHTE HHLTGAARGP AAVIDTILDV AEALADTARR EGLAPVALGL AVPGVIDEAQ GVAIWSANIG FRDVPLRKLA AARLGMPAAL GHDVRVGGLA EARLGAGRSA RHVLFVAIGT GIAAAHVIDG AAAAGAHGAA GELGHVLVRP GGPRCGCGRD GCLEAVASAS AVARRYAELA STAPDAPEAS AAEVATRAAA GDPLAQQVWT DAVEALADGL ATGQALFDVE AVVLGGGLAR AGAQLLDPLR AALHDRMTFH REPRLVPAAL GAEAGCLGAA LLALDDLEKP
|
| |