| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_0272 |
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| Symbol | |
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| ID | 5705266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 303878 |
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| End bp | 304822 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641269799 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001535194 |
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| Protein GI | 159035941 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02957] RNA polymerase sigma-70 factor, TIGR02957 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0946583 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTGCTGA GTTCGCACGA GGTCGAGCTG TTCGAGCACT CCAGGGCCCG CCTGGAGGCG
ATCGCCTACC GTCTGCTCGG CTCGGCGAGC GACGCGGAGG ATGCGGTTCA GGACACATTT
CTGCGGTGGC AGGCCGCCGA TCGCCGCCAC GTCCAGACGC CCGAGGCGTG GCTGACGAAG
GTGCTCACCA ACCTGTGCCT CAACCAGCTC ACCTCGGCGC GGGCCAGGCG CGAGACGTAT
GTGGGCACGT GGCTTCCCGA GCCGGTACTC GCCGGAGACC GGATGCTCGG CCCGGTCGAC
ACCGTCGAGC GACGGGAGTC GGTCTCGATG GCGGTGCTCG CCCTCATGGA GCGGCTTTCG
GCCAACGAGC GTGTCGTGTA TGTGCTCCGC GAGGCATTCG GGTACTCGCA CGGTGAGATC
GCCGAGATCC TCGACCTCAC CGAGTCGAAC TGCCAACAGA TCTACCGGCG TGCCAAGCAG
CACATCGTCA CCGACCGGGT GCGTACGGAA GCAGACGCGA GCAGCACGCG GAAGATCGTC
GAGGAGTTCC TCGTCGCGGC CACCAACGGC AAGATCCAGC GGTTGGTCGA GCTGTTGGCC
GACGACGCGA CGAGTATCGG CGATGGCGGT GGCAAGATCC CGGCCCGGAC CACGCCGATC
ACCGGAGCGC TGACGGTGGC GAGGTTCCTC CGCGGCCTGT TCAAGCCCAC CAAGGCCAAG
CGTGACCTGA TCGGCGGCCG GCCTGCCGTC TACGCCGGTG TCGTCAACGG CGGGCCCGCG
GTGGTGTTCG TGATCGGCGA CCGGGTCGTC GGCGTCATGT CCCTGCACGT GACGTCCGAG
GGCATCTCGG CCATCCACAC CCAGGTCAAC CCCGACAAGC TTGCCCGCGT CACACGGCTG
TGGTCCGGGT CCGAGCACGG TGAACCCCTC CTCGAAGCCT GGTGA
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| Protein sequence | MLLSSHEVEL FEHSRARLEA IAYRLLGSAS DAEDAVQDTF LRWQAADRRH VQTPEAWLTK
VLTNLCLNQL TSARARRETY VGTWLPEPVL AGDRMLGPVD TVERRESVSM AVLALMERLS
ANERVVYVLR EAFGYSHGEI AEILDLTESN CQQIYRRAKQ HIVTDRVRTE ADASSTRKIV
EEFLVAATNG KIQRLVELLA DDATSIGDGG GKIPARTTPI TGALTVARFL RGLFKPTKAK
RDLIGGRPAV YAGVVNGGPA VVFVIGDRVV GVMSLHVTSE GISAIHTQVN PDKLARVTRL
WSGSEHGEPL LEAW
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