| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_0263 |
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| Symbol | |
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| ID | 5705278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 290768 |
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| End bp | 292522 |
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| Gene Length | 1755 bp |
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| Protein Length | 584 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641269791 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_001535186 |
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| Protein GI | 159035933 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00970] 2-isopropylmalate synthase, yeast type |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00953684 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000495197 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGCCCACC CTGCTGTCAC CCCTGACGCT GAGACTGATC CGATCGCCCG GCAACAGCCC
AGCCGCATGC CGTACCACCG CTACCAGCCC TACCAGCAGC AGTTCCGCAC CGACCTACCG
GACCGCAGCT GGCCGAACCG GCGCGTCGAG ACCGCGCCGC GCTGGTGCGC GGTCGACCTG
CGGGACGGCA ACCAGGCTCT CATCGACCCG ATGTCGCCCG AGCGCAAGCG ACGGATGTTC
CAGCTCCTGG TACAGCTGGG CTACAAGGAA ATCGAGGTGG GCTTCCCGTC GGCGAGCCAG
TCCGACTTCG ACTTCGTCCG ACAGCTCATC GAGCAGGACC TGATCCCCGA CGACGTCACC
ATCCAGGTGC TGACCCAGTG CCGGGAGCAC CTGATCGACC GCACCTTCGC GGCGCTGCGG
GGCGCGAAGC GGGCGATCGT GCACTTCTAC AACTCGACGT CGACGCTGCA ACGCCGGGTG
GTCTTCGGAC TGGACCGGGA CGGCATCACC GACATCGCGA CCACCGGCGC CCGGCTCTGC
CAGAAGTACG CGGAGATCCA CACCCCGGAC ACGGACATCC ACTACGAGTA CTCGCCCGAG
TCGTACACCG GCACGGAACT GGACTACGCC CTGGAGGTCT GCGCAAAGGT GATCGAGGTC
GTCGACCCGA CGCCCGACCA CCGACTGATC GTCAACCTGC CGGCCACCGT CGAGATGGCG
ATGCCGAACG TGTACGCCGA CTCGATCGAG TGGATGCACC GACACCTGCC CCGGCGGGAC
AGTCTGGTGC TCAGCCTGCA CCCGCACAAC GACCGCGGCA CCGGGGTGGC CGCCGCCGAA
CTGGGCCTGC TGGCCGGAGC GGACCGAATC GAGGGCTGCC TGTTCGGCAA CGGCGAGCGC
ACCGGCAACG TGGACCTGGT GACCCTGGGC CTGAACCTCT TCTCCCAGGG CATCGACCCG
ATGATCGATT TTTCGAACAT CGACGAGATC AAACGTACGG TCGAATACTG CAACCAGCTA
CCCGTGCACG AGCGCCACCC GTACGTCGGG GACCTGGTCT ACACCGCCTT CTCCGGCTCC
CACCAGGACG CGATCAAGAA GGGATTCGAC GCCCTGTCGG CAGACGCCGC GACCGCCGGC
GTTCCCGTCG AGAAGCACTC GTGGGCGGTG CCGTACCTGC CGATCGACCC GAAGGACCTG
GGCCGCACCT ACGAGGCCGT CATCCGGGTC AACTCGCAGT CCGGCAAGGG CGGCGTCGCG
TACGTCATGC AGACCGAGCA CCAGCTGGAC CTGCCCCGCC GGCTCCAGAT CGAGTTCTCC
GGCGTGGTCC AGCAGGTCAC CGACAACGAC GGCGGCGAAG TCGACCCACA GACCATGTGG
GAGATCTTCG CCGGACAGTA CCTGCTCGAC CACCAGACGA ACCCCTCGGT CACGCTGACC
GACTACACGC TCGCCACTGT CGACGGCAAG GTCGAGTTCG AGGCGGTCGT CGGGTACGAC
GGCGAACGGC ACACCGTCAC CGCGGTCGGC AACGGCCCGG TCGACGCGTA CGTCAACGCA
CTACAGTCAC TCGGAGTCAA CGTCCGCGTC CTCGACTACC ACGAACACGC CCTCTCCTCC
GGCGGGGACG CCCAGGCCGC CGCGTACGTG GAATGCGAGG TGGACGGCCG CACGGTGTGG
GGCGCCGGCG TGGACGCCAA CATCGTCACC GCCACCATCA GGGCGGTGAC CAGCGCCGTC
AACCGCACCC GCTGA
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| Protein sequence | MAHPAVTPDA ETDPIARQQP SRMPYHRYQP YQQQFRTDLP DRSWPNRRVE TAPRWCAVDL
RDGNQALIDP MSPERKRRMF QLLVQLGYKE IEVGFPSASQ SDFDFVRQLI EQDLIPDDVT
IQVLTQCREH LIDRTFAALR GAKRAIVHFY NSTSTLQRRV VFGLDRDGIT DIATTGARLC
QKYAEIHTPD TDIHYEYSPE SYTGTELDYA LEVCAKVIEV VDPTPDHRLI VNLPATVEMA
MPNVYADSIE WMHRHLPRRD SLVLSLHPHN DRGTGVAAAE LGLLAGADRI EGCLFGNGER
TGNVDLVTLG LNLFSQGIDP MIDFSNIDEI KRTVEYCNQL PVHERHPYVG DLVYTAFSGS
HQDAIKKGFD ALSADAATAG VPVEKHSWAV PYLPIDPKDL GRTYEAVIRV NSQSGKGGVA
YVMQTEHQLD LPRRLQIEFS GVVQQVTDND GGEVDPQTMW EIFAGQYLLD HQTNPSVTLT
DYTLATVDGK VEFEAVVGYD GERHTVTAVG NGPVDAYVNA LQSLGVNVRV LDYHEHALSS
GGDAQAAAYV ECEVDGRTVW GAGVDANIVT ATIRAVTSAV NRTR
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