Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_0259 |
Symbol | |
ID | 5705409 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 286822 |
End bp | 287937 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641269787 |
Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
Protein accession | YP_001535182 |
Protein GI | 159035929 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.21107 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00198643 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGCTGACA ACGACATCCT CGTCGAGGTC CGTGATCTGA AGGTGCACTT TCCGATCAAG CGGGGGGTGC TGTTCGACCG CACGATCGGC CACGTGAAGG CGGTCGACGG GGTCGACCTG CAGATTCCGC GCGGGAAGAC GTACGGTCTG GTAGGCGAGT CCGGGTGCGG TAAGTCCACG CTCGGCCGGG CACTGCTCCA GCTGACCGCG CCGACCAGTG GCGAGGTCGT GTTCGACGGT GTCGAGCTGA CCACGCTGCC GTCGGCCCGG CTGCGGTCCA TGCGTCGTCG GATGCAGATG ATTTTCCAGG ATCCGATGTC CAGCCTGGAC CCGCGGCAGA ACGTCGAGTC GATCCTCACC GAGGGCCTGC ACACCCACGG CATCGGCAGT GACCGAGACG AGCGGCGCAC GATCATCGGG GAGGCGCTCG ACAAGGTGGG CCTGCCCCGG TGGGCGTTGT CCCGTTACCC GCACGAGTTC TCCGGTGGGC AGCGGCAGCG CATCGGCATC GCCCGGGCGT TGGTCCTCGG TCCGGAGCTG ATCGTCGCCG ACGAACCGGT GTCCGCCCTG GACGTGTCGA TCCAGGCGCA GGTGGTCAAC CTACTTGACG AACTGCAGGA CAGCCTGGGT CTCACCTATC TGGTGATCGC GCACGACCTG GCCGTCGTGC GGCACATCTC CGACACGGTC GGCGTTATGT ACCTCGGGGC CCTCGTCGAG GAAGCGTCGA GCGACCGGCT CTACACCGAA CCGCTGCACC CCTACACTCG GGCGCTCATG TCGGCGGTGC CGGTGCCGGA CCCGGACGTG GAGGACCGCC GCGAGCGCAT CCTGCTCGCC GGTGACCTGC CGTCGCCGGC CAACCCGCCG GCGGGGTGCC GGTTCCACAC CCGCTGCCCG TGGGCCCAGC CGACCCGCTG TGCCGACGAA CGGCCGGTGC TGCGGGACAT CGGTGGCACC CGGGTCGCCT GCCACTGGGC CGAGCGGATC GCCAGCGGGG AACTCCGTCC ACAGCAGGTG GGGGTGCGAG CCGCCCGGCC AGTGGATGGT GGCGAAGCCC CGCGGCCGGT GTCGACCCCG GCTCCTACCG ACGAGGTGGA TTCCGGCGAG GCCTGA
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Protein sequence | MADNDILVEV RDLKVHFPIK RGVLFDRTIG HVKAVDGVDL QIPRGKTYGL VGESGCGKST LGRALLQLTA PTSGEVVFDG VELTTLPSAR LRSMRRRMQM IFQDPMSSLD PRQNVESILT EGLHTHGIGS DRDERRTIIG EALDKVGLPR WALSRYPHEF SGGQRQRIGI ARALVLGPEL IVADEPVSAL DVSIQAQVVN LLDELQDSLG LTYLVIAHDL AVVRHISDTV GVMYLGALVE EASSDRLYTE PLHPYTRALM SAVPVPDPDV EDRRERILLA GDLPSPANPP AGCRFHTRCP WAQPTRCADE RPVLRDIGGT RVACHWAERI ASGELRPQQV GVRAARPVDG GEAPRPVSTP APTDEVDSGE A
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