Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_0220 |
Symbol | |
ID | 5706124 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 251378 |
End bp | 253030 |
Gene Length | 1653 bp |
Protein Length | 550 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641269749 |
Product | histidine kinase |
Protein accession | YP_001535146 |
Protein GI | 159035893 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.122039 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00447833 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGCGACGCC GGGCGCCGAG GTGGCGGCTG CGGCGCTGGG CGCACTGGAA CCTGCGGTCC CGGCTGGTCG TGGTCGTCGC GGCACTCACC GCACTCGCAC TGGTCGCCGC CAACGCCGCC GGCGTGGTGC TGCTGCGCCG GACCCTCATC GAGCGGATCG ACGACCAGCT GTCCGCAGTC AACCGTCCGT TCAACCGGGA CGGCCCCACA CCGTACGACC ATCCTCGGGT GTTCCCGAAC GTCAAGCTCG GGCCCGAGCA GGTGCTGCTG CTCTATGGTG CCGACGGCCG GCTCAGGGAC GTGCGCCGGT CGGACGAGTC GAACGACCTG CCGATACTCG AACCGTACGA GCAACTGGTC GCGGATGCGG CGGCGGGCCG GCCGTACTCT GTCGGGGGTG TCGACGGTAC GTCGCCGTGG CGAGTGCTGG TGGTTGATCG TGGCGGCGAC CGCGGGGTGG CGGTGCTGGC GGTGTCGCTG CGTGAGGTCG ACGAAACCGT TGGTCTCCTC CTGCTGATCG ACATCGTGGT CGTCCTGATC GCGCTGTTCC TGCTGGGCTT TCTCGCGGCG GTGGTGGTCC GGCTCGGGCT GCGTCCACTG ACCCGAATGG AGTGGGTCAC GGCCGAGATC ACTGCTGGGA ATCTGGACCG TCGGGTTCCG GATGCCGATC CGCACACCGA GCCAGGTCGC CTTGGGGGCG CGCTCAACCT GATGTTGGAC CGGATCTCTG CCGAGGTCGC GGCGCGCCGT GACTCGGAGC GGCGGCTGCG GGATTTCGTC GCCGACGCGT CACATGAGCT GCGTACGCCA CTGACCTCGA TCCGTGGCTT CGCCGAGCTG TACCGCCGGG GCGGCGCGCC GCCGGGGCCG GACCTGGACG AGACGATGAC CCGGATCGAG GCCGAGGCGG CTCGGATGGG ACTGCTGGTC GAGGATTTGT TGCTCCTGGC CCAGCTCGAC CACGATCGCC CGGCGCGGCG GCGTCCGGTG GACCTGCTGG CAGTCGCCGC CGACAGCGTC CGGGACGCAC ACGCCCGGGC GCCGTTTCGG GACATTCGGC TCACCGCGCT TGACGACGAC GCCCTGTTCG AGGCGGTCAC GGTCAGCGGC GACGACCATC GACTACGCCA GGTAGCAGCC AACCTGGTCA GCAACGCGCT CCAGCACACC CCGCCGGACG TGCCGGTCAC GGTGCGGGCT GGCCGTTCGC ATCGAGTTCC GGCCGGGCCG GCCCCCACGG TGTCAGTCGG CGGCTCGCTG CCAGCCGAGG AGCCTGTCGC CGTGCTGGAG GTCACCGACA CCGGGCCGGG AATCGCCGCT GATCAGGCGG TGCGGGTGTT CGAGCGGCTC TTTCGGGCGG AGCGTAGTCG TAGCCGCGGT AGCGGAGGTT CCGGGTTGGG TCTGTCCATC GTGGCAGCCA TTGTCAGCGC GCATCGGGGG CGAGTCGAGC TGGTCACCGC CCCCGGCCGG GGCGCGACGT TCCGGGTGCT GCTGCCGGCG GTCTCTGGCA GCGGCCGGGA CGAGCCGGGT GACCTGCCTC GCGGCGTCGC GCATGACACT CCCAGCCGGT TCCGAGGTTG CCCTGGGTTG CCTCCGAGCT GCGGGTTCCA AGGTGTTGAC CATGCGTGTG CGACGACTCC TCCCGGCGCC TAG
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Protein sequence | MRRRAPRWRL RRWAHWNLRS RLVVVVAALT ALALVAANAA GVVLLRRTLI ERIDDQLSAV NRPFNRDGPT PYDHPRVFPN VKLGPEQVLL LYGADGRLRD VRRSDESNDL PILEPYEQLV ADAAAGRPYS VGGVDGTSPW RVLVVDRGGD RGVAVLAVSL REVDETVGLL LLIDIVVVLI ALFLLGFLAA VVVRLGLRPL TRMEWVTAEI TAGNLDRRVP DADPHTEPGR LGGALNLMLD RISAEVAARR DSERRLRDFV ADASHELRTP LTSIRGFAEL YRRGGAPPGP DLDETMTRIE AEAARMGLLV EDLLLLAQLD HDRPARRRPV DLLAVAADSV RDAHARAPFR DIRLTALDDD ALFEAVTVSG DDHRLRQVAA NLVSNALQHT PPDVPVTVRA GRSHRVPAGP APTVSVGGSL PAEEPVAVLE VTDTGPGIAA DQAVRVFERL FRAERSRSRG SGGSGLGLSI VAAIVSAHRG RVELVTAPGR GATFRVLLPA VSGSGRDEPG DLPRGVAHDT PSRFRGCPGL PPSCGFQGVD HACATTPPGA
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