Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_0163 |
Symbol | |
ID | 5706353 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 175890 |
End bp | 177470 |
Gene Length | 1581 bp |
Protein Length | 526 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641269689 |
Product | amidophosphoribosyltransferase |
Protein accession | YP_001535089 |
Protein GI | 159035836 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0034] Glutamine phosphoribosylpyrophosphate amidotransferase |
TIGRFAM ID | [TIGR01134] amidophosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.124827 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000251042 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGCCCCGAG GCGATGGCCG GCTGAGCCAC GACCTTGACC CCCAGCGTCC CGGGCCTCAG GACGCGTGCG GCGTCTTCGG TGTCTGGGCG CCCGGCGAGG AGGTCGCCAA TCTGACCTAC TTCGGGCTGT ACGCGTTGCA GCACCGGGGG CAGGAGGCGG CCGGAATCGC GGTCAGCGAC GGCACGGGCG TGGTGGTCTA CAAGGACCTC GGCCTGGTCG CCCAGGTCTT CGACGAACCG ACACTGGCCA GCCTGCGTGG GCACGTGGCG ATCGGCCACG CGCGTTACTC GACCACCGGT GCCTCCACCT GGGAAAACGC CCAGCCGACC ATGCGGTCGA CCACATCCGG CACGACGATC GCCCTGGCGC ACAACGGCAA CTTGGTCAAC GCGGCCGAGT TGCATCGTGC GGCCGGCGAA CGGGAACTGA TGGCAGACGG GGCCACCAAC GACACCTCCC TGGTGACCAT GCTGCTGGCC AGCCGCCCCG ACCTGTCGGT CGAGGCCGCC GCGTTGGAGG TGTTGCCCCA GCTGCGGGGA GCGTTCAGCT TCGTCTTCAT GGACGAGTCG ACGCTGTACG CGGCTCGGGA CCAGCACGGG GTGCGTCCGT TGGTGTTGGG CCGGCTGGAG CGTGGTTGGG TCGTGGCCAG CGAGACGGCC GCGCTCGACA TCGTCGGTGC CAGTGTGGTC CGTGAGGTCG AGCCCGGTGA GCTGATCGCG ATCGACGAGG ACGGGCTACG GTCCGCCCGG TTCGCCTCGC CGGAGCCGAA GGGCTGCCTC TTCGAATACG TCTACATCGC CCGTCCGGAC GCCACGATCG CCGGCCGGAA CGTGCACGCG GCGCGCGTGC AGATCGGTCG CCAGCTCGCC CGGGAGCACC AGGTCGACGC CGACCTGGTG ATTCCCGTGC CCGAGTCGGG GACGCCCGCC GCGATCGGCT ACGCAGCGGA GTCCGGCATC ACCTTCGGTG CCGGCCTGAT GAAGAATCCG TACGTCGGCC GGACGTTCAT CCAGCCGTCG CAGACGCTGC GCCAGCTCGG TATCCGACTC AAGCTCAACC CGCTGCGGGA GAACGTGCGG GGCAAGCGGC TGGTCGTCGT CGACGATTCC ATTGTTCGTG GCAACACCCA GCGGGCCATC GTGCGGATGC TCCGCGAGGC CGGCGCGTTG GAGGTGCACG TCCGTATTTC CTCGCCGCCG GTCGCCTGGC CGTGCTTCTA CGGCATCGAC TTCGCCACCC GCGCCGAGCT GCTGGCGAAC GGCCTGGACA ACGAGGGCAT CCGGCGGTCG ATCGGCGCCG ACACGCTCGG TTACGTATCG CTCAGCGGCC TGATCGCGGC CACCGAACAA CCGAAGAGCC GGCTCTGCCG CGCGTGCTTC GACGGCGAGT ACCCGATCGA CCTGCCCCCG GACACCCTGA TTGGCAAGCA CGTGCTCGAG GGGGTTGGTC GGCGGGTCGC CGCGGAGTCG CCCGACCTCC ACTCCGCTCC GCTCGTCGCC GCCCTCAGCG GCCACGACAC GTTCAGCTCG GCGCGGGCGC CGCGCCCCGA CCCGGAAGAG CCGACCACCC ACCGCCGGTA G
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Protein sequence | MPRGDGRLSH DLDPQRPGPQ DACGVFGVWA PGEEVANLTY FGLYALQHRG QEAAGIAVSD GTGVVVYKDL GLVAQVFDEP TLASLRGHVA IGHARYSTTG ASTWENAQPT MRSTTSGTTI ALAHNGNLVN AAELHRAAGE RELMADGATN DTSLVTMLLA SRPDLSVEAA ALEVLPQLRG AFSFVFMDES TLYAARDQHG VRPLVLGRLE RGWVVASETA ALDIVGASVV REVEPGELIA IDEDGLRSAR FASPEPKGCL FEYVYIARPD ATIAGRNVHA ARVQIGRQLA REHQVDADLV IPVPESGTPA AIGYAAESGI TFGAGLMKNP YVGRTFIQPS QTLRQLGIRL KLNPLRENVR GKRLVVVDDS IVRGNTQRAI VRMLREAGAL EVHVRISSPP VAWPCFYGID FATRAELLAN GLDNEGIRRS IGADTLGYVS LSGLIAATEQ PKSRLCRACF DGEYPIDLPP DTLIGKHVLE GVGRRVAAES PDLHSAPLVA ALSGHDTFSS ARAPRPDPEE PTTHRR
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