| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_0146 |
|---|
| Symbol | |
|---|
| ID | 5706586 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 157762 |
|---|
| End bp | 158682 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641269672 |
|---|
| Product | dehydratase |
|---|
| Protein accession | YP_001535072 |
|---|
| Protein GI | 159035819 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.861571 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.0000240434 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGGGAGGCC CACAGGAGCC GGCCGGCACC GGTCAGATCG CCCGGTCCCG AGTCCGGCTG
GCGGACCTGC CGGCGATCGG CGCGTCCTAC CGACGGGCGC TGCTCGGCGC GCTGCCCGGG
AGCGGATCAC GGCGGGCCGG GAGGCCGCCG GCGGTCGAGT TGTGCGTGGA CGGTGTCGGC
GTCGACCGGG CGCGTCTCGC CGCCTACGAC CGGGTCTGCG GGTTCCGGCT CACCGACCGG
CTGCCCGCGA CGTTCCCACA CGTCATGGGC TTCCCGCTGG CGCTGCGCCT GATGACCGCG
CCGGACTTTC CGATCCCGCT CACCGGCGTG GTACACGTCG GGAACCGGAT CACCGTGCAC
CGACCCGTCG ACGCCGCCGA AACCCTCGAT TTCAGTGCGT ACGCGACGAA CCTCCGCCCA
CACGAACGAG GCCGACAAAT CGACATGGTG CTGATCGGCG CCGTCGACGG CGAGGAGGTG
TGGCGGGGCG TCTCCACCTA CCTGTCCCGG GAACACACAT CCGACGCTGG TGAACGGCAC
GATCGGGGCG AACGGCCTCC GGCGCCGCCC GCCTCCGCGT TCTGGCGCGT CGGGCGCCGG
GTCGGTCCCG CGTACGCCCA GGTCTCCGGC GACCACAACC CGATCCACAC CTCACGGCTC
GGGGCCCGGC TGTTCGGCTT CCGGCGCCCG ATCGCACACG GCATGTGGAG CAAGGCGCGC
TGCCTGGCCG CACTGGAGCC GCGGCTGCCG GACGCGTACA CGGTCGATGT GGCGTTCAAG
TTGCCGTTGC CGCTGCCCGG CACGGTCGCC TTCGGTGGCA CCCCGGCGGG CGACTTCGCG
CTGCGCGACG TGCGTGGCCG CCCCCATCTC CTCGGCACGC TCCGAGAGCG GGGAAGGGGT
CCTTCTCCAC GCCTTTTGTA G
|
|---|
| Protein sequence | MGGPQEPAGT GQIARSRVRL ADLPAIGASY RRALLGALPG SGSRRAGRPP AVELCVDGVG
VDRARLAAYD RVCGFRLTDR LPATFPHVMG FPLALRLMTA PDFPIPLTGV VHVGNRITVH
RPVDAAETLD FSAYATNLRP HERGRQIDMV LIGAVDGEEV WRGVSTYLSR EHTSDAGERH
DRGERPPAPP ASAFWRVGRR VGPAYAQVSG DHNPIHTSRL GARLFGFRRP IAHGMWSKAR
CLAALEPRLP DAYTVDVAFK LPLPLPGTVA FGGTPAGDFA LRDVRGRPHL LGTLRERGRG
PSPRLL
|
|---|
| |