Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_0142 |
Symbol | |
ID | 5706582 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 154647 |
End bp | 155861 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641269668 |
Product | acyl-CoA dehydrogenase domain-containing protein |
Protein accession | YP_001535068 |
Protein GI | 159035815 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0485827 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00000521293 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGCCGAGT TCTCGCTCGA TCTGACAGAG GAACAGCGAG ATCTTCGTGA CTGGGTGCAC GGCTTCGCCA CCGAAGTCGT CCGCCCGGCC GCGGCCGAGT GGGACGCCCG GGAGGAAACA CCGTGGCCGA TCATCCAGGA GGCGGCCAAA GTTGGCCTCT ACGGCTTCGA GTTCCTCACG ACCTGCTGGG GCGACCCCAG CGGCCTCTCC CTGCCGATCG CCTGCGAGGA ACTCTTCTGG GGTGACTCCG GCATCGGCCT GAGCATCTTC GGCACCGGCC TCGCCGTGGC CGCCATCTAC GGCTCCGGAA CCCCGGAGCA GCTGCTGGAG TGGGTGCCGC AGTGCTTCGG TGACCTTGAC TCCCCCACCG TGGCGGCGTT CTGCACCAGC GAACCCGAAG CCGGCTCCGA CGTCGGGGCG ATACGCACCC GGGCGGTCTA CGACCAGGCC ACCGACGAGT GGGTACTGAA CGGCCAGAAG GCGTACGCCA CCAACGGCGG GATCGCCGGC GTACACGTGG TGACCGCCTC GGTCGACCCG GAACTCGGGT CACGAGGGCA GGCGGCGTTC GTCGTACCGC CGGGTACCGC AGGGCTCACC GCGACCCGCA AGCTACGCAA GCTGGGCCTG CGCGCCTCGC ACACCGCGGA TGTCTTCCTC GACGACGTCC GCCTACCCGG CCGCTGCCTG CTCGGCGGCA AGGAGGCGCT GGACGAGCGG CTCGCCCGGG CCCGCTCCGG CCAGCGGGCC GCGTCGCAGG CGGCCATGCG CACGTTCGAA CTGTCCCGGC CGACCGTCGG CGCGCAGGCG CTCGGAGTGG CCCGGGCGGC CTACGAGTAC GCGCTGGACT ACGCGAAGGA ACGGGTCCAG TTCGGGCGGC CCATCATCGA GAACCAGGCG GTGGCGTTCA CGCTGGCCGA CATGAAGATG GAGATCGACG CTGCCCGGCT GTTGGTCTGG CGCGCCTCCT GGATGGGACG CAACAATCGG CCCTTCACCG CCGGCGAGGG CTCGATGTCC AAGCTGAAGG CCGGTGAGGT GGCGGTCACC GTGACCGAGA AGGCCGTGCA GCTACTCGGT GGTGCCGGCT TCCTCCGCGA CCACCCGGTC GAGCGGTGGT ACCGGGACGC CAAGATCTAC ACCATCTTCG AAGGCACCTC CGAGATTCAG CGGCTCGTCA TCGCCCGCGC CGTCTCCGGC GTCCAGATCC GCTGA
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Protein sequence | MAEFSLDLTE EQRDLRDWVH GFATEVVRPA AAEWDAREET PWPIIQEAAK VGLYGFEFLT TCWGDPSGLS LPIACEELFW GDSGIGLSIF GTGLAVAAIY GSGTPEQLLE WVPQCFGDLD SPTVAAFCTS EPEAGSDVGA IRTRAVYDQA TDEWVLNGQK AYATNGGIAG VHVVTASVDP ELGSRGQAAF VVPPGTAGLT ATRKLRKLGL RASHTADVFL DDVRLPGRCL LGGKEALDER LARARSGQRA ASQAAMRTFE LSRPTVGAQA LGVARAAYEY ALDYAKERVQ FGRPIIENQA VAFTLADMKM EIDAARLLVW RASWMGRNNR PFTAGEGSMS KLKAGEVAVT VTEKAVQLLG GAGFLRDHPV ERWYRDAKIY TIFEGTSEIQ RLVIARAVSG VQIR
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