Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_0141 |
Symbol | |
ID | 5706581 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 153113 |
End bp | 154549 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641269667 |
Product | major facilitator transporter |
Protein accession | YP_001535067 |
Protein GI | 159035814 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0000428453 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | GTGCAGGCCC TCGTCATCGT GACCCCGTCG CTGCTGGCAC GATTCGCGAG CACAGCTACC ACGGGTGACG CCGATGCCGG TCCCGCCGGA CTGGCTAGGC TGATCTTCAC AATGACTCGG ACCGCACACC GCCACCGGAC GCCGTTGCTG CTGGTCGAAG CGGCGACGCT GCTCTCGGCG ACCGGCAACG GCGTGGCCAT CGTGGCACTG CCCTGGCTGG TGCTGGAGCG CACCGGCAGC GCCACCGCGG CCGGCGTCGT GGCGGCGGCC AGCGGGCTAC CGCTGCTGCT GTCCAGCCTC CTCTCCGGCA CGGTCGTCGA CCTACTCGGA CGCCGCCGGA CCGCGCTGGC CTCCGATGCC CTGTCCGCCA TCTCGGTGGC CGCGATCCCG CTCGTCGACA CCCTGCTCGG GCTGAACCTC GGCTGGATCG TCGCGCTGGC CGTCCTCGGC GCGGTCTTCG ACCCAGCCGG GATGACCGCG CGGGAGACGC TGCTGCCCGC AGCCGCGCAG GCCGCCGGGT GGCGGATCGA GCGAGCGAAC GGCATACACG AGGCGATCTT CGGACTGGCA TTCCTGATCG GCCCGGGGCT CGGCGGCCTG CTCATCGCCA CGGTCGGTCC GGAGGCGACG TTCTGGGTCA CCGCCGCCGG CTTCGCACTG TCCGTCCTCC TGATCGCCGC CGTCCGGCTG CCCGGCGCGG GCCGACCCGA ACGCCCGCCC AACGGCCTGT GGCGGGGCAC CCAGGAGGGC CTGGTCTTCG TCTGGCGGGA TCCCCTGCTG CGCACCATCG CCCTGATCAC GATGGTCCTG GTCGCGCTCT ACCTACCGGT CGAGGGGGTC CTGCTGCCCG CCTGGTTCGT CGCCGAGGGG GAACCCGCCC GCCTCGGTGC CGTCCTGATG GCGATGAGCG CCGGGGCCGT GGCAGGTGCG CTGGGCTCGT CGGCGGCCGG CCGGTTCGTC CGCCGCCGGC ACCTGATGGC CGTCGCCCTC GTGGTCACCG GCGTGGCCCT GCTCGGGCTC GCGTTCCTAC CGCCATATCC GGCGATGCTC GCCTTCGCCG TCCTGGTCGG GCTCGCGTAC GGACCGGTCA ACCCGCTGGC CAACTACGCC ATGCAGACCC GCACCCCGGA GCGGCTACGC GGCCGGGTGG TCGGGGTGAT GACGTCGTTC GCGTACGCCG CCGGGCCGGC CGGCTACCTG CTGGCTGGCC CCCTGGTGGA GTGGTTGGGC CTGGCCACGG CGTTCCTGGT GCTCGCCGGT GCGCTGCTGG TGACCGCGCT GGCCGCCGCG CCGCTGCCGG TGCTGGCGGC GTTGGACGAA CCACCCCGGT ACCCACCCGC ACCACCCGGC GGGACCTCGG GTCGCAGTGA GGGACCGGTG CCGCTGGGTG AACAGTGGTT GCCCGCCGCC CACCGCGACC CGCCAGCGAT CGGCTAA
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Protein sequence | MQALVIVTPS LLARFASTAT TGDADAGPAG LARLIFTMTR TAHRHRTPLL LVEAATLLSA TGNGVAIVAL PWLVLERTGS ATAAGVVAAA SGLPLLLSSL LSGTVVDLLG RRRTALASDA LSAISVAAIP LVDTLLGLNL GWIVALAVLG AVFDPAGMTA RETLLPAAAQ AAGWRIERAN GIHEAIFGLA FLIGPGLGGL LIATVGPEAT FWVTAAGFAL SVLLIAAVRL PGAGRPERPP NGLWRGTQEG LVFVWRDPLL RTIALITMVL VALYLPVEGV LLPAWFVAEG EPARLGAVLM AMSAGAVAGA LGSSAAGRFV RRRHLMAVAL VVTGVALLGL AFLPPYPAML AFAVLVGLAY GPVNPLANYA MQTRTPERLR GRVVGVMTSF AYAAGPAGYL LAGPLVEWLG LATAFLVLAG ALLVTALAAA PLPVLAALDE PPRYPPAPPG GTSGRSEGPV PLGEQWLPAA HRDPPAIG
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