Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_0084 |
Symbol | |
ID | 5707089 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 97223 |
End bp | 97864 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641269610 |
Product | rare lipoprotein A |
Protein accession | YP_001535010 |
Protein GI | 159035757 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0797] Lipoproteins |
TIGRFAM ID | [TIGR00413] rare lipoprotein A |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.332012 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0350309 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCGGCA GGCACGCGCG TACCCGAAGG TTGTCCCCGA CCGCCATCGC GGCCACCGCA GCGGTTGGTG TCGCGCTCGC GATCGGTGGG ACCGTGGGCG CCGTCCGGCT CACCTCCGGC GACGTGTCCG ACCGGTCCGT CGCGGTCGCG CCGACCGAGG TCGACCCTCC GGCCGCCGCA TCCGCCCCGC CGAGCGGCTC GCCGAGCGCC AGTGGCTCAC CGAGCGCCAG TGGCTCACCC AGCTTGCCGA GTCCGATCGC GAGCCCGGCG TCGGTCCGGA AGACGCAGGC GCCCTCCCGG AGCAAGCCGA GGACCGCGAC TCCGCAGCCG ACCGCGACCA ACTCGTCCGC TCCTGCGGTG GAGACCGGCT CGTGTGGCGC CTCGTACTAC TCCGAGGGGC AGCTCACCGC GAGCGGGGAG CCGTTCGACC CGTCGGCCAT GACCGCCGCC CACAAGACCC TGCCGTTCGA CACGAGGGTG CGGGTCACCA ATCCGGCTAC CGGCACGTCG GTGACCGTGC GGATCAACGA CCGGGGCCCG TTCGTCGAAG GACGCTGCAT CGACCTGTCC CGGGCGGCCT TCGCCGAGAT CGCCCCACTG AGTGCGGGTC ACGTCGAGGT CCGGTACGAG GTCCTGGGCT GA
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Protein sequence | MAGRHARTRR LSPTAIAATA AVGVALAIGG TVGAVRLTSG DVSDRSVAVA PTEVDPPAAA SAPPSGSPSA SGSPSASGSP SLPSPIASPA SVRKTQAPSR SKPRTATPQP TATNSSAPAV ETGSCGASYY SEGQLTASGE PFDPSAMTAA HKTLPFDTRV RVTNPATGTS VTVRINDRGP FVEGRCIDLS RAAFAEIAPL SAGHVEVRYE VLG
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