Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_3647 |
Symbol | |
ID | 4605894 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 4298594 |
End bp | 4299127 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639783072 |
Product | F0F1 ATP synthase subunit delta |
Protein accession | YP_929519 |
Protein GI | 119776779 |
COG category | [C] Energy production and conversion |
COG ID | [COG0712] F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) |
TIGRFAM ID | [TIGR01145] ATP synthase, F1 delta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000294276 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.00000779697 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGGCTGAGT TAACCACCAT TGCTCGCCCT TATGCAAAGG CAGCTTTTGA TTTTGCCGTT GAAAAACAAG CCGTGGACAG CTGGGCCGAA ATGCTCGGTT TTGCTGCGCT GGTAAGTGAA AACGAAACCA TGCGCCCACT GCTCGCTGGC TCTATGGCCA GTAGCGCGCT CGCCAAACTC TTTATTGACG TTTGTGGTGA GCAGCTCAAC GAGCACGGTC AAAACCTGAT CAAGGTGATG GCTGAAAACG GTCGTTTGGA AGTACTGCCT GCTGTGGCTC AGCTGTTCGC TGAGTACCGT TTGGAATGGG CCAAGGAAGT AGAAGCCGAT GTGGTTTCCG CCACCGAGCT TTCCGACGCA CAACAACAGC AGATTGGTGT TTCCCTAGAG AAACGTCTCG CACGCAAAGT TAAGCTGAAT TGCAGCGTGG ATGCCGGCCT GATCGCCGGT GTAATTATCA AGGCAGGGGA CCTCGTTATC GATGGTTCTG TGAGCGGCAA ACTGGCCCGC CTGTCTGATA AGCTGCAATC GTAA
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Protein sequence | MAELTTIARP YAKAAFDFAV EKQAVDSWAE MLGFAALVSE NETMRPLLAG SMASSALAKL FIDVCGEQLN EHGQNLIKVM AENGRLEVLP AVAQLFAEYR LEWAKEVEAD VVSATELSDA QQQQIGVSLE KRLARKVKLN CSVDAGLIAG VIIKAGDLVI DGSVSGKLAR LSDKLQS
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