Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_3646 |
Symbol | |
ID | 4605893 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 4297038 |
End bp | 4298579 |
Gene Length | 1542 bp |
Protein Length | 513 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639783071 |
Product | F0F1 ATP synthase subunit alpha |
Protein accession | YP_929518 |
Protein GI | 119776778 |
COG category | [C] Energy production and conversion |
COG ID | [COG0056] F0F1-type ATP synthase, alpha subunit |
TIGRFAM ID | [TIGR00962] proton translocating ATP synthase, F1 alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00183846 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.000012076 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGCAACTGA ATTCCACTGA AATCAGCGAT CTGATTAAGC AGCGGATCGA GCAGTTCGAC GTAGTCAGCG AAGCCCGTAA CGAAGGTACT ATCGTTGCGG TAAGCGATGG CATCATCCGC GTACACGGCC TGGCCGATGT AATGCAGGGT GAGATGATCG AACTGCCTGG CAACCGTTAT GCAATCGCGT TGAACCTTGA GCGCGACTCT GTCGGTGCTG TAGTAATGGG TCCTTATGCC GATCTGGCTG AGGGCGTAAA AGTGAAAACC ACTGGCCGTA TTCTGGAAGT TCCAGTTGGC CGCGGTCTGC TGGGCCGTGT GGTAAACACG CTGGGTGAGC CAATCGACGG CAAGGGCCCC ATCGACAACG ATGGTTTTGC TCCTGTTGAA GTGATTGCTC CAGGTGTAAT TGACCGTAAG TCAGTTTCTC AGCCAGTTCA GACTGGTTAC AAAGCCGTTG ACTCCATGAT CCCAATCGGT CGTGGCCAGC GTGAGCTGAT CATCGGTGAC CGTCAGACTG GTAAAACTGC GATGGCTATC GACGCCATCA TCAACCAGCG CGATTCTGGC ATCAAGTGTG TGTACGTGGC TGTAGGCCAG AAGGCTTCTA CCATCGCCAA CGTAGTACGC AAGCTGGAAG AGCACGGTGC TCTGGCTAAC ACTGTTGTGG TTGTTGCTTC TGCTTCAGAA GCCGCTGCTC TGCAGTTCCT GGCGCCATAC TCTGGTTGTA CCATGGGTGA ATACTTCCGT GACCGCGGTG AAGATGCCCT GATCGTATAC GATGACCTGT CTAAGCAGGC TGTTGCTTAC CGTCAGATCT CCCTGCTGCT GCGTCGTCCT CCAGGACGTG AAGCTTACCC AGGTGACGTA TTCTATTTGC ACTCTCGTCT GCTGGAACGT GCTTCCCGCG TGAACGAAGA GTACGTTGAG AAGTTCACCA AGGGCGCCGT GACTGGCAAG ACCGGTTCTT TGACCGCTCT GCCTATCATC GAAACCCAAG CCGGTGACGT ATCTGCGTTC GTACCGACCA ACGTAATTTC GATTACCGAC GGTCAGATCT TCCTGGAAAC CAACCTGTTT AACTCTGGCC TGCGTCCAGC GGTTAACCCA GGTATTTCGG TATCCCGTGT AGGTGGTGCC GCCCAGACCA AGATCATTAA GAAACTGTCC GGTGGTATCC GTACCGCGCT GGCACAGTAT CGTGAGCTTG CTGCGTTCTC TCAGTTTGCA TCTGATCTTG ACGATGCAAC TCGTGCCCAG TTGGAGCACG GTGAGCGTGT TACCGAACTG ATGAAGCAGA AGCAATATGC CCCAATGAGC GTAGCCGAAC AGGCTGTGGT GATCTTCGCC GCAGAAAAAG GCTTCCTGAA GGGTATTGCT CTGAAGAAAG TTGGTGATTT CGAAGCCGCT CTGCTCGCTT TCATGAACGC CGAGCATGCC AACCTGATGA AGCTTATCAA CGATACCGGC GACTATAACG CCGAAATCGA AGCTGAGCTG AAGGCTGGTC TCGACAAGTT CGTGGCAACC CAAACCTGGT AA
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Protein sequence | MQLNSTEISD LIKQRIEQFD VVSEARNEGT IVAVSDGIIR VHGLADVMQG EMIELPGNRY AIALNLERDS VGAVVMGPYA DLAEGVKVKT TGRILEVPVG RGLLGRVVNT LGEPIDGKGP IDNDGFAPVE VIAPGVIDRK SVSQPVQTGY KAVDSMIPIG RGQRELIIGD RQTGKTAMAI DAIINQRDSG IKCVYVAVGQ KASTIANVVR KLEEHGALAN TVVVVASASE AAALQFLAPY SGCTMGEYFR DRGEDALIVY DDLSKQAVAY RQISLLLRRP PGREAYPGDV FYLHSRLLER ASRVNEEYVE KFTKGAVTGK TGSLTALPII ETQAGDVSAF VPTNVISITD GQIFLETNLF NSGLRPAVNP GISVSRVGGA AQTKIIKKLS GGIRTALAQY RELAAFSQFA SDLDDATRAQ LEHGERVTEL MKQKQYAPMS VAEQAVVIFA AEKGFLKGIA LKKVGDFEAA LLAFMNAEHA NLMKLINDTG DYNAEIEAEL KAGLDKFVAT QTW
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