| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3590 |
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| Symbol | |
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| ID | 4605837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 4222736 |
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| End bp | 4223377 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639783011 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_929462 |
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| Protein GI | 119776722 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGACC CGGGCCGCCC CAAGGGTGAC AGTGACGCCA GAGCCAGATT AATTGCCGCG
GCGATAGAGT GTTTTACTGA GCAGGGCTAT CAGGCGGTGT CCACCCGCAG CATCGCCCGC
ACAGCCGGCG TGGATGCCGC CATGATCCGT TACTACTTCG GTGGCAAACC CGGGCTCTTT
GAACACATGG TCAGGGAAGT CTTATCCCCC GTACTGGCGA GGTTTCAGAG CCTCTCGCAG
CAAGGCGCAC CGTCGGATTT GACGGCGCTG ATGCAAACCT ATTACCGCGC CATTGGTGCT
CACCCCAGAT TGCCCCGATT GATACTGACG GTATTGCACG AAGGCCACAG CAGTGAGGCA
TTCAGGTTGC TGATGTCAGT CTTTGGTGAC GTATTGCGCC TGTCACACAG CTGGTTGATG
CAGTCGTTGG TGGCCAATGG CGCCATTCGC GCCGACGTGG ATCCGCAGCT GGCTCGTCTC
AGTCTCATCA GCCTGATGGT GTTCCCCCTG ATTGCCCCGC CTGCCCTGGT CGATTCGCTG
GGGATAGACA CCAGCCCAGA GGGGCTGATG CGCTTGGTGC CCCATCATAT CGCTGTACTG
AGCCAAGGTA TTTTGGCAAG TGATGCCGGA GATAAATCAT GA
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| Protein sequence | MSDPGRPKGD SDARARLIAA AIECFTEQGY QAVSTRSIAR TAGVDAAMIR YYFGGKPGLF
EHMVREVLSP VLARFQSLSQ QGAPSDLTAL MQTYYRAIGA HPRLPRLILT VLHEGHSSEA
FRLLMSVFGD VLRLSHSWLM QSLVANGAIR ADVDPQLARL SLISLMVFPL IAPPALVDSL
GIDTSPEGLM RLVPHHIAVL SQGILASDAG DKS
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