| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3587 |
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| Symbol | |
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| ID | 4605834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 4219699 |
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| End bp | 4220826 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639783008 |
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| Product | ABC transporter, permease protein, putative |
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| Protein accession | YP_929459 |
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| Protein GI | 119776719 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0842] ABC-type multidrug transport system, permease component |
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| TIGRFAM ID | [TIGR00025] ABC transporter efflux protein, DrrB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGCTTA GAATTCTGGC CATCCTCACC AAAGAGCTGA AACAGCTGTC ACGGGATCGC
ATGACCTTCG GCATGATAGT GATGATCCCA CTGGTACAGC TGATGCTGTT TGGTTACGCC
ATCAATACCG ATGCCAGGCA TCTGCCCGCC GGATTGGTGG ATATGAGCGG CAACAGCCAG
GGCAGAGCTC TGGTGCAGGC CGTTTCTGCC ACGCAAGTGG TCGACTTTAT TGAGTCTTAT
CAGTCAATTG CCCAGGCTGA GGAGGCGATT ACCGCCGGAC ATGTGAAGGC TGCACTGGTG
ATCCCTGCTG ACTTTGGTTC CCGTCTGATT AGCCATCCAC AGGCACAGAC CGGCCAGGGG
GCCTATTTTT CGCGCCCGGT GGCACAGTGG CTGGTGGATG GTTCAGATAC GGTGGTGGCT
TCTACCATCA AGTCACTCAG AACCATGCCG TTATCTGAAG TGCTTGGGCT GCCGGTGCCC
GAGAGCACCG CCACCATGGA GGTGGTGATG TACTTCAACC CCGAGCAACG TACCGTGGTC
AACATAGTCC CGGGTCTTCT CGGGGTAATA CTGACCATGA CTATGGTGCT CTTTACCTCG
GCCGCCATTG TGAGGGAGCG GGAGCAGGGT AACATGGAGT TTTTGATCAC CACGCCGGTC
AAGCCGCTGG AGCTGATGCT GGGCAAGATT TTGCCCTACG TGTTGGTGGG CTTTGTGCAG
GTGGCCATTA TTCTGGGAGC AGGTAAGTTG TTGTTCGCCC TGCCCATACG GGGAGGCCTT
GAATCGCTGG CGTTGGCGGC CATGCTGTTT ATTCTGGCGA GTCTCACCCT TGGCCTGGTG
ATTTCCACCA TAGCCCGTAC CCAACTGCAG GCCATGCAGA TGACGGTGTT TATCCTGCTG
CCATCCATAC TGCTGTCCGG CTTTATGTTT CCCTACGAAG CCATGCCCGT ACCGGCGCAG
TGGATTGCCG AAGCTCTGCC GGCAACGCAC TTTATGCGCA TGTCCCGGGC AATTATTCTG
CGGGATGCCG AGGTAACGCA GCTGGGATTC GATGCGCTCT GGTTGTTGGG TTTCTGTGCC
CTGGGGCTGC TGGTGGCTAC CCTCAAATTT AACAAACGAC TGGATTGA
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| Protein sequence | MWLRILAILT KELKQLSRDR MTFGMIVMIP LVQLMLFGYA INTDARHLPA GLVDMSGNSQ
GRALVQAVSA TQVVDFIESY QSIAQAEEAI TAGHVKAALV IPADFGSRLI SHPQAQTGQG
AYFSRPVAQW LVDGSDTVVA STIKSLRTMP LSEVLGLPVP ESTATMEVVM YFNPEQRTVV
NIVPGLLGVI LTMTMVLFTS AAIVREREQG NMEFLITTPV KPLELMLGKI LPYVLVGFVQ
VAIILGAGKL LFALPIRGGL ESLALAAMLF ILASLTLGLV ISTIARTQLQ AMQMTVFILL
PSILLSGFMF PYEAMPVPAQ WIAEALPATH FMRMSRAIIL RDAEVTQLGF DALWLLGFCA
LGLLVATLKF NKRLD
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