| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3559 |
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| Symbol | |
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| ID | 4605806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 4193424 |
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| End bp | 4195031 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639782980 |
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| Product | putative efflux pump component MtrF |
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| Protein accession | YP_929431 |
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| Protein GI | 119776691 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2978] Putative p-aminobenzoyl-glutamate transporter |
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| TIGRFAM ID | [TIGR00819] p-Aminobenzoyl-glutamate transporter family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACCA ACTCCCGGGA GGCGATGGCC TCTGAAACAC CGGAAGACAT CGCCAAAAGC
GGCTGGTTTG TCCGGTTTTT GAATCTGGTG GAACGTCTGG GGAACCTCTT ACCCCATCCC
ATCACCCTGT TTGCCATGTT CTGTGTTGCT GTGGTGCTGC TGTCCGGGAT CCTGGGCTAT
TTCGAACTTT CGGTGACAGA CCCCCGCCCC GAAGGCGCCT CAGGTCGCAG TGCCGACGGC
ATCATTTCGG TCGTCAGCCT GATGAATGCC GAGGGCCTGC GCCTTATAGT CTCCAACCTG
GTGACCAATT TCACCGGTTT TACGCCCCTG GGTACTGTGT TGGTTGCCCT GCTTGGGGTG
GGCATTGCCG AGCGCTCAGG GCTGCTCAGC GCTGCCATGC GCGCACTGGT AATTGGCCGC
TCCCGCCGCC TTGTAACCGT CACCATCGTC TTTGCCGGTA TCGTTTCCAA CACGGCCTCC
GAGCTTGGCT ATGTGGTGCT TATCCCCATG GCGGCAATGA TTTTTCACTC CCTTGGAAGA
CATCCCTTAG CCGGTTTGGC TGCCGCGTTT GCCGGGGTTT CGGGTGGTTA CAGTGCCAAC
TTGCTGCTGG GCACCATAGA CCCCTTGCTG TCGGGCATCA CCGAAGCTGC TGCCCGTATG
ATTGACCCCG AATATGTGGT CGGCCCGGAG GTGAACTGGT ACTTCATGTT TGCCTCTACC
TTTGTCGTGT CCTTTATGGG CGCCTGGGTA ACCGAAAAAA TCGTCGAGCC CAAGTTGGGC
AAGTACGACC CCAGCGAAGC CTCAGTCGAT CTCGACGGTC AGGCCATGGA GCAGGTCACT
GACATCGAGC GCCACGGCCT GAAAATGGCG GGATTGGCTG TTCTGGTACT GGGCGTCATT
CTGGCATTGA CCGTGGTTCC TGAAGGTGCG CCGCTGCGTC ATCCGGATAC AGGCCTGGTG
GCAGGCTCCC CCTTCCTCAA GGGGATTGTG GTGTTCATCT TCATCTGCTT TGCCATTCCG
GGCCTGGTGT ATGGCAAGGT GGTGGGCACC ATGAAGAAAG ACACAGATGT GATCAATGCC
ATGAGCCACA GCATGGGTAC CATGGGCATG TACATAGTGC TGGTGTTCTT CGCTTCCCAG
TTTGTAGCGT TTTTCAAATG GACCAATCTC GGTGCCGTGC TGGCGGTGAT GGGCGCTGAT
GCCCTGAGCG CCATCGGGCT GACAGGCCCG TTGCTGTTTT TGCTGTTTAT CGCCATGTGC
GGCTTTATCA ACCTGATGCT GGGTTCGGCG TCGGCGCAAT GGGCGGTCAC GGCACCGATT
TTTGTGCCCA TGTTGATGTT GGTGGGTTAT GCCCCGGAAA CCATTCAGGC GGCGTACCGG
ATTGGTGATT CGGTGACTAA CCTGATTACC CCCATGATGA GCTATTTCGG TCTTATTCTG
GCGGTGGCCT GTCGTTACAA AAAAGACATG GGCATCGGCA CTCTGGTGGC GACCATGCTG
CCTTATACCC TGGTGTTTTT TGTCGGTTGG ACCAGCTTCT TCTTCCTGTG GGTGTTCGGC
TTTGGATTAC CTGTGGGGCC GGGCGCCGCC ACTTACTACA CTCCTTAA
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| Protein sequence | MSTNSREAMA SETPEDIAKS GWFVRFLNLV ERLGNLLPHP ITLFAMFCVA VVLLSGILGY
FELSVTDPRP EGASGRSADG IISVVSLMNA EGLRLIVSNL VTNFTGFTPL GTVLVALLGV
GIAERSGLLS AAMRALVIGR SRRLVTVTIV FAGIVSNTAS ELGYVVLIPM AAMIFHSLGR
HPLAGLAAAF AGVSGGYSAN LLLGTIDPLL SGITEAAARM IDPEYVVGPE VNWYFMFAST
FVVSFMGAWV TEKIVEPKLG KYDPSEASVD LDGQAMEQVT DIERHGLKMA GLAVLVLGVI
LALTVVPEGA PLRHPDTGLV AGSPFLKGIV VFIFICFAIP GLVYGKVVGT MKKDTDVINA
MSHSMGTMGM YIVLVFFASQ FVAFFKWTNL GAVLAVMGAD ALSAIGLTGP LLFLLFIAMC
GFINLMLGSA SAQWAVTAPI FVPMLMLVGY APETIQAAYR IGDSVTNLIT PMMSYFGLIL
AVACRYKKDM GIGTLVATML PYTLVFFVGW TSFFFLWVFG FGLPVGPGAA TYYTP
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