| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3553 |
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| Symbol | |
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| ID | 4605800 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 4184976 |
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| End bp | 4186112 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639782974 |
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| Product | multidrug resistance protein AcrA/AcrE family |
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| Protein accession | YP_929425 |
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| Protein GI | 119776685 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGCAAA TGTTAAAAAT TGCCTCGGCC ATAGGCATGG TCTTGTGGGT CAGTGCCTGC
CAGGAAGATG CTCAGCAAGC TGCCAACCAG CAGCAAATGC CTCCCATGGA AGTCGGCACA
GTGCAGGTCA CTGCAGCGCC TCAAAACATC ATGGTTGAGC TGCCCGGTCG CAGCCGCGCT
TTCCTCGAGG CCGAGGTTCG CCCTCAGGTT TCTGGCATCA TCATGGAGCG TAACTTCGTT
GAAGGTCGTG AAGTGAAAGA AGGTCAGTCA CTCTACAAAA TTGACGATGC CACCTATAAG
GCCACCCTCG AAAGCGCCAA GGCCGACCTC GCCAGCGCAC AGGCCTCATT GGCCAGTGCC
AAAGCCCGCG CCGCCCGCTA CGAAAAGTTG GTGAAAACCA ATGCCATTTC CAAGCAGGAC
TTCGACGAAG CCGATGCCGC CTATAAGGAA GCACTCGCCC GGGTGAAAGT GGCCGAGGCC
CAGCTGCATA CCGCCAATAT CAATCTGAAC TACACCGAAG TGCAGGCCCC AATTTCAGGC
CGCATCGGTA AATCGTCCGT CACGCCTGGT GCGTTGGTAA CCGCCAATCA GGGACAGGTA
CTGGCCACTA TTCAGCAGCT GGACCCCATC AATGTGGACA TCACCCAATC CAGCGCCCAA
CTGCTGGCCC TCAAGGCCAA GCTGCGAGCC GGTAAGCTGC AGGCGGCCGA CAACGCCGAA
GTGCAGCTGG TACTGGAAGA TGGCACAACT TACGAGCACA AGGGCAAGCT GCAATTTGCC
GAAGTGAGCG TGGATGAAAA CACGGGTTCT GTGATTCTGC GGGCCGAGTT CCCCAACCCA
GACAACGTGT TGCTGCCGGG TATGTATGTA CGCGCCATGC TGAACACCGG GGTAGATCCC
AACGCCATTC TGGTGCCGCA AAAGGCCATT ACCCGCAATA CCCGTGGTGA AGCCGTGGCC
ATGGTGGTGA ACGCCGAAAG CAAGGTTGAA GCCCGCACCG TGACCACTGC CGAGGTTATC
AACCACCAGT GGCGTATTAC TTCGGGGCTG AATGCAGGCG ATAAATTGAT TGTAGAAGGG
CTGCAGAAAA TACGCCCAGG TGCACCGGTC ACTGCCACAG CGGCGCAGGC CAAGTAA
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| Protein sequence | MRQMLKIASA IGMVLWVSAC QEDAQQAANQ QQMPPMEVGT VQVTAAPQNI MVELPGRSRA
FLEAEVRPQV SGIIMERNFV EGREVKEGQS LYKIDDATYK ATLESAKADL ASAQASLASA
KARAARYEKL VKTNAISKQD FDEADAAYKE ALARVKVAEA QLHTANINLN YTEVQAPISG
RIGKSSVTPG ALVTANQGQV LATIQQLDPI NVDITQSSAQ LLALKAKLRA GKLQAADNAE
VQLVLEDGTT YEHKGKLQFA EVSVDENTGS VILRAEFPNP DNVLLPGMYV RAMLNTGVDP
NAILVPQKAI TRNTRGEAVA MVVNAESKVE ARTVTTAEVI NHQWRITSGL NAGDKLIVEG
LQKIRPGAPV TATAAQAK
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