| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3541 |
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| Symbol | |
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| ID | 4605788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 4173236 |
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| End bp | 4174129 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639782962 |
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| Product | pirin-like protein |
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| Protein accession | YP_929413 |
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| Protein GI | 119776673 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1741] Pirin-related protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAACAG AAGCAACGCA GCCAGTCACA GAGCGACTGC TCCCCAGAAC CAGCGACGTT
GGTGGCATAC CTGTGGCCAG GGCCATTCCC CAAAAGGCCA GACGCCTGAT CGGTCCCTGG
TGTTTTTTGG ACCATCTCGG CCCAATTTCA GGCCCGGCAA CCGTGAATGT GGGTGAGCAC
CCGCACACGG CACTGCAAAC CTTCACCTGG ATGATGGCAG GTGAGATATT GCACCGCGAC
AGCCTCGGCA GTGCTCAGGT GATACGACCC GGCCAGGTGA ATCTGATGAC GGCAGGCCAT
GGTATCGCCC ACACCGAAGA GTCTTTGCCA AATCAGACCC ATCTGCACGC CGCTCAGTTT
TGGATAGCGC TGCCTGCTGC CCACAAGGAC ACAGCACCCA GGTTCGATCA TTATCCCACA
CTGCCCCGTT GGCAGGATGC CGGGGCAAAT TTCACCCTGC TGGTAGGTGA CTGGGGCAAT
CATCGCTCGC CGGTGCTGCA CTTCTCACCC ATATTGGGGC TGGAGATTTT CCACAGTGCC
GACACAGGGG CGCCTGTGAC CCTGACGTTG CCCCTCGAGC CAACATTCGA GTACGGGCTC
ATGCCACTGG AGGGCAGCTT CCAGTTGGCA GGCGAGAGCT TCAGCGATAA CCAGCTGGCG
TTTGTGAACA GGGGCGAGAC ATCAGTGACC ATCCGCTTGC AGGCAGGATG CCGCCTGCTG
CTTATCGGTG GTGAGCCCTT AACCGATGAC ATCACTATCT GGTGGAACTT TGTTGGTCAC
AGCAAAGCCG ACATCGCAGA GGCCCAAGCA CAGTGGCTTG CACAGGATCC CCGCTTCGGA
CCTGTCACCG GTTATCAGGG GCAACGCCTG GAGCCGCCAC CCATCCCCTG GTGA
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| Protein sequence | METEATQPVT ERLLPRTSDV GGIPVARAIP QKARRLIGPW CFLDHLGPIS GPATVNVGEH
PHTALQTFTW MMAGEILHRD SLGSAQVIRP GQVNLMTAGH GIAHTEESLP NQTHLHAAQF
WIALPAAHKD TAPRFDHYPT LPRWQDAGAN FTLLVGDWGN HRSPVLHFSP ILGLEIFHSA
DTGAPVTLTL PLEPTFEYGL MPLEGSFQLA GESFSDNQLA FVNRGETSVT IRLQAGCRLL
LIGGEPLTDD ITIWWNFVGH SKADIAEAQA QWLAQDPRFG PVTGYQGQRL EPPPIPW
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