| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3522 |
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| Symbol | |
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| ID | 4605769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 4155111 |
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| End bp | 4157021 |
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| Gene Length | 1911 bp |
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| Protein Length | 636 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639782943 |
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| Product | putative methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_929394 |
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| Protein GI | 119776654 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTTAA ACATGCTTAC CATCAAACAA AAGATTTTGC TTACCGTTTC ACTGGCGGTA
ATCCTTTCCA CCGTCGCGGT TGGGCTATTG GGGCAGCACA GCGCCAGAGA CGTGGTAGAG
CAGCGGATGC TGGGCTCGGA AATGCCTGCC AAAATGCTGA GTATCCGCAA CGAGCTTGAA
AAAGACATGG TAAGCCTGCT TAACGCTGCC AAGCAGCTGG CCGACAGCCG TATGTTGGGC
AAATGGCTGG AGCAGGGCCG TCCTGCAGAA GATGAGTCCC GAGTGGTGAG CCAGTTGCAG
GACGTCGCCA GCCAATACCA GCTGGCACAG GCCTCCTATG CCGACCGTGA AACCGGTGCC
TACTACACCC AGAGTGGCTT TTTACGCATT TTGACCCCGG AGCAGGATGG CTGGTTTTTC
GATTACCGCA GCAGTGGTGT GCAACAACGT TTGAATGTAT TTACCGAAGC CAACGGTGAT
GTGAAGCTGT TTATCAACTA TCAGCAGCTC AATGGTCGCG GCCTTGCGGG GCTGGCCAAG
TCGCTGGATG CCATGGTTCA GCGGCTCACG TCTTTTAAGC TGGAAGAATC TGGCTTTGTC
TATCTGGTCG ATGCCAAGGG TGAAGTGCAG CTTCACTCAG ATCCTGGCAA AATTCGTAAA
GCCACCCTCA ACTCCTTGTA TGGTAAAAGC GGCAGCTTGT TGTCCAGGGC CGATTTCAAC
TACATGGAAG TGGAAGTGGA CGGCCAGCCT ATGATGGTGG CCAGCAGCTA TTTGCCCTCC
ATCGATTGGT ACCTGGTGGC CCAGGTGCCC GAGGCCGAAG TGTTCGCCCT GCTGGATGAA
GCCGCGCTGA AAATTCTATT TTCTACCTTG TTGATTGCGC TCGCCTTTGT GGTGTTGTCT
GGCTTTGTGG CGTCCAGTGT CAGTAAGCCT ATCGCCGCCG TGGCACGTAT GTTCCGTGAC
ATAGGTGAAG GCGAGGGGGA CTTGCGTCAG CGTTTGCCGG TGCAGGGTGA AGATGAATTG
GCGCAGCTGG CCAGTGGCTT TAACAGCTTT ATCAGTAAAA TCCAGGACTC TGTGATTGAA
GTGGCCCAAA CCAGCGAGCA GCTCGGCAAA TCGGCCATCG ATGTGTCGCG CCAGGCGCAG
CAAACACTGG AAGACAGTCA GGACCAGAAA GATCGCACCA TGCAGGTGGT GACCGCCATC
AATGAGATGG GCGCCACTGT GAACGAGATT GCAGCGAATG CAGCCCAGGC AGCTGAAGCG
GCCAAGGACG CCGACCGGGC CTCTGGCTCG GGTCAGAAGG TGGTGACCCA GGCTCGGGAT
ACCATCAATC AGCTCTCCAA AGATGTGTCT CAGGTGGGTG AAGTAATTGA GTCCCTGGCC
ACCCACACCA AGTCCATCGG CAGTATTCTG GACGTGATTC GCGCGATTTC AGAGCAAACC
AACCTGTTGG CGCTCAACGC TGCCATTGAG GCGGCCCGTG CAGGGGAAGC CGGTCGTGGA
TTTGCCGTGG TGGCCGACGA AGTGCGTAAT CTGGCATCGC GCACAGCAGC CTCCACCGAT
GAAGTACAGG TGATGATAGA CAAGCTGCAA TCTGAATCCG CCAGGGCTGT CAATGCCATG
TCCCAGAGCC GCAGCCGCTC CCAGGAAGGG GTGTCGGCGG TGGATGAAGC CAGCAATACC
CTGAGCGGCA TTTCCGATCA GATTGGGCTT ATCAGCGACA TGAATATTCA GGTGGCCGCC
GCGACCGAAG AGCAGTCGAC CGTCGTGGAG GATATTAACC GCAATGTGAC CGAGATTAAC
GATATCACCC AGCGCACCGC TGCAACGGCA CAGGCAGCTG CCCGAGCCAG TAAAGATCTT
AATGCCCTTG CCACTCGCCT CGATCAGCTG GTGGCCCGCT TTAAGGTGTA A
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| Protein sequence | MNLNMLTIKQ KILLTVSLAV ILSTVAVGLL GQHSARDVVE QRMLGSEMPA KMLSIRNELE
KDMVSLLNAA KQLADSRMLG KWLEQGRPAE DESRVVSQLQ DVASQYQLAQ ASYADRETGA
YYTQSGFLRI LTPEQDGWFF DYRSSGVQQR LNVFTEANGD VKLFINYQQL NGRGLAGLAK
SLDAMVQRLT SFKLEESGFV YLVDAKGEVQ LHSDPGKIRK ATLNSLYGKS GSLLSRADFN
YMEVEVDGQP MMVASSYLPS IDWYLVAQVP EAEVFALLDE AALKILFSTL LIALAFVVLS
GFVASSVSKP IAAVARMFRD IGEGEGDLRQ RLPVQGEDEL AQLASGFNSF ISKIQDSVIE
VAQTSEQLGK SAIDVSRQAQ QTLEDSQDQK DRTMQVVTAI NEMGATVNEI AANAAQAAEA
AKDADRASGS GQKVVTQARD TINQLSKDVS QVGEVIESLA THTKSIGSIL DVIRAISEQT
NLLALNAAIE AARAGEAGRG FAVVADEVRN LASRTAASTD EVQVMIDKLQ SESARAVNAM
SQSRSRSQEG VSAVDEASNT LSGISDQIGL ISDMNIQVAA ATEEQSTVVE DINRNVTEIN
DITQRTAATA QAAARASKDL NALATRLDQL VARFKV
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