| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3510 |
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| Symbol | ompR |
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| ID | 4605757 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 4144996 |
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| End bp | 4145721 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639782931 |
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| Product | osmolarity response regulator |
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| Protein accession | YP_929382 |
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| Protein GI | 119776642 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGACAGG AAACCTCCAA GATTCTGGTC GTTGATGATG ATATGAGACT CAGAGCCCTG
CTGGAGCGCT ATCTGGTGGA GCAGGGATTT CAGGTCAGAG CAGCCGCCAA CGCCGAGCAA
ATGGACCGGC TGCTGGAGCG CGAGAATTTT CATTTACTGG TATTGGATTT GATGCTGCCC
GGTGAGGATG GCCTGTCTAT TTGCCGGCGA TTGCGCCAGA CCGGCAGCCC CCTGCCTATT
ATCATGCTCA CTGCCAAAGG CGATGAAGTC GACCGCATTA TCGGCCTTGA GCTGGGTGCA
GATGATTACC TGCCCAAACC CTTTAATCCA CGGGAACTGC TGGCGCGTAT CAAAGCCGTG
ATGCGCCGTC AAACTCAGGA AATTCCCGGT GCGCCGGCGC AGCAGGAAGA AGAAGTGGGT
TTTGGTGAGT TTCATCTCAA TCTGGCTACC CGCGAAATGT ATCGCGGTGA CGAGTCCATT
GCTCTCACCA GCGGCGAGTT TGCCGTGCTT AAGGTCTTGG TGACGCATCC ACGTGAACCC
CTCTCCCGGG ATAAGCTGAT GAATCTGGCC CGGGGCCGCG ATTATTCGGC ACTGGAGCGT
TCCATCGACG TGCAGGTATC CCGCCTTCGA CGCCTGATTG AAAAAGATCC CGCCAATCCA
AGGTATATCC AAACCGTGTG GGGCCTGGGC TATGTGTTTG TACCCGACGG CAGCGCCCGT
CGTTAA
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| Protein sequence | MGQETSKILV VDDDMRLRAL LERYLVEQGF QVRAAANAEQ MDRLLERENF HLLVLDLMLP
GEDGLSICRR LRQTGSPLPI IMLTAKGDEV DRIIGLELGA DDYLPKPFNP RELLARIKAV
MRRQTQEIPG APAQQEEEVG FGEFHLNLAT REMYRGDESI ALTSGEFAVL KVLVTHPREP
LSRDKLMNLA RGRDYSALER SIDVQVSRLR RLIEKDPANP RYIQTVWGLG YVFVPDGSAR
R
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