Gene Sama_3498 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3498 
Symbol 
ID4605745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp4130000 
End bp4130821 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content51% 
IMG OID639782919 
Productprotein-glutamate O-methyltransferase 
Protein accessionYP_929370 
Protein GI119776630 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG1352] Methylase of chemotaxis methyl-accepting proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCAAA GGGATTTTGA GTTCATCCGG GAGCTGGCCT ACAACCAAAC AGGCATTGTC 
TTACCTGAAC GGAAGCGCCA TATGGTGTAT TCCCGCCTTT GCCGTCGCCT GCGCGCACTG
CGGATGCGCA CCTTCTTCGA ATACTGTGGC TACCTGCAAC AGGAGCCCGA TGAGATGGGC
CACTTTATCA ACGCCCTGAC CACGAACCTC ACCGCCTTCT TTCGTGAGAA GCACCACTTT
CATTATGTGC GGGATCATCT GGTACCCAAA TGGCAGCAAA GGCGCAGTCG TCGTCTGCGG
GTCTGGTCTT CTGCCTGCTC AACCGGTGAA GAGCCCTACT CCCTCGCCAT GACCTTAGCG
CCCTTTTTTC CACGCACTCA GTGGGATTTG AAAATTCTGG CGACCGATTT AGACACGAAT
GTCTTAACCA AGGCCGAGGC GGGGTTCTAC CCCCCAGAAA CCCTCGAAAA TCTGCCTCCA
ACACTGGCAG AACAGTATTT CACGGCTCAG GGAGGCATGG CCAAGGTAAA GGACTCGGTG
CGGGAACTGG TGTTTTTCCG CCAGCTTAAC CTGTTGGAGA GCTGGCCAAT GCAAGGCCCC
TTCGATGCCA TTTTTTGCCG TAATGTACTC ATTTATTTCG ATAATCCGAC AAAGAAAAAA
ATCATTCAGA AGTTCAGACA ACTGCTCAGC GATGATGGGT ATCTCTTTAT TGGCCATTCG
GAAACCCTGC ACCTGATTTC CGATGACTTT GATCTCATTG GCCAGACCAT ATACAAACCC
AGAATAGGCA GCATTTCGGG ACTTAACGGG GAAAGAAAAT GA
 
Protein sequence
MTQRDFEFIR ELAYNQTGIV LPERKRHMVY SRLCRRLRAL RMRTFFEYCG YLQQEPDEMG 
HFINALTTNL TAFFREKHHF HYVRDHLVPK WQQRRSRRLR VWSSACSTGE EPYSLAMTLA
PFFPRTQWDL KILATDLDTN VLTKAEAGFY PPETLENLPP TLAEQYFTAQ GGMAKVKDSV
RELVFFRQLN LLESWPMQGP FDAIFCRNVL IYFDNPTKKK IIQKFRQLLS DDGYLFIGHS
ETLHLISDDF DLIGQTIYKP RIGSISGLNG ERK