| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3492 |
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| Symbol | |
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| ID | 4605739 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 4123163 |
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| End bp | 4123798 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639782913 |
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| Product | electron transport protein SCO1/SenC |
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| Protein accession | YP_929364 |
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| Protein GI | 119776624 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.1904 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAT CCTGGATGAT GGCCGTCTTC TTCCTGGTGG GGATGGGCGG TCTGACACTG
CTGATAAACT CGGGCGACAC CAGTGATAGC CAGACACCAC CCACACTGGA CACGGGTTAT
GTGTTTCCTG CGCCCAAGCC GTTACCTCCT TTTAAACTGA CCGATCAGCT GGGGCAAACC
TTTGACAATC AAAGGCTCAT GGGCAAGTGG AGCCTGATTT TTCTGGGTTA CACCTCTTGC
CCTGACATCT GTCCAACGAC CATGTCAAAG CTGGCGGCGG CTTATCCTGA ACTGAATCAG
GAAAATTCGC TGCAGGTGAT TTTTCTCTCT GTCGACCCGG CGCGGGACAC GCCAACCAGG
CTGGCCCAAT ATGCGGCCTT TTTCCATCCG GATTTTCTCG CCGTCACCGG AGAGCACAGC
GAGTTATATT CGCTTACCCG GTCTCTGGGC ATGGTGTACA CCATGGTAGG TGATGGCCCC
GACTATCAGG TCGACCACAG TGCCTCCATC GTTGTGATTT CACCCAAAGG TGAAAGGTAC
GCCGTATTCA AACCCAAGAA CGATGGCCAA TCCATTCCAC AAATACGCAA TCAGGCGCTG
ATTTCTGATA TGCGCCTGAT TCGTCATCAA TACTGA
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| Protein sequence | MKKSWMMAVF FLVGMGGLTL LINSGDTSDS QTPPTLDTGY VFPAPKPLPP FKLTDQLGQT
FDNQRLMGKW SLIFLGYTSC PDICPTTMSK LAAAYPELNQ ENSLQVIFLS VDPARDTPTR
LAQYAAFFHP DFLAVTGEHS ELYSLTRSLG MVYTMVGDGP DYQVDHSASI VVISPKGERY
AVFKPKNDGQ SIPQIRNQAL ISDMRLIRHQ Y
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