| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3491 |
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| Symbol | |
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| ID | 4605738 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 4122255 |
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| End bp | 4123154 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639782912 |
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| Product | protoheme IX farnesyltransferase |
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| Protein accession | YP_929363 |
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| Protein GI | 119776623 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
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| TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.104999 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAAAT CTCTCTCCAT TACCCCTGTG TCAGGCCTGT CCCGTTTACC ATGGCGCGCC
TATTTGGAAA TGACCAAACC CAAGGTGGTT ACCTTGATGC TGCTGACAGT GCTTGTGGGC
ATGTGCCTGG CATTGCCGGG GGCCGTACCA CTGCAGCCAT TGATTGCCGG CATGCTGGGG
ATCGCCATGA TGGCGGGCGC CGCAGCCGCG ATGAACCATC TCATTGACCG TCGTATCGAT
GGTCTGATGG CACGCACCTA TAATCGTCCG CTCCCCAAGG GCAAGGTGCC CGTCAGCCAT
GCCGCTACCT TTGCCGCCCT GCTGGCACTG CTTGGTTTTG CCTGCCTCTA CTGGTTGGTT
AATCCACTCA CTGCCTGGCT GACACTGGCG AGCCTGCTTG GCTATGCTGT GGTCTACACC
GCTTACCTCA AGCGTGCGAC ACCACAAAAC ATTGTGATTG GCGGACTCGC CGGCGCCATG
CCCCCCTTAC TGGGCTGGAC AGCGGTGACC AATGATTTCC ACGGCCATGG GTTGCTGCTG
GTGATTATTA TCTTCGCCTG GACCCCACCC CACTTTTGGG CGCTGGCGAT ACATCGTAAA
GCGGACTACG CCAAAGTCGA CATTCCCATG CTGCCCGTCA CCCACGGCGT GGCATTTACC
AAGACCTGTA TCTTTCTTTA CACTATCTTG CTTGCATTGG CCTGCCTGCT ACCCGTATTG
GTTGGCATGA GTGGGGCCTT GTATTTGCTG GGTTCAACCT TGCTGAGTAT CGGCTTTATC
TACAAGGCAT GGCAGCTTAA GTATCATGAG ACCCCAGGCA TGGCGATGGA CGTGTTCCGC
TTTTCTATCT ATCACCTGAT GCTGCTGTTT ATCCTGCTGC TGGTTGACCA CTACATATAG
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| Protein sequence | MAKSLSITPV SGLSRLPWRA YLEMTKPKVV TLMLLTVLVG MCLALPGAVP LQPLIAGMLG
IAMMAGAAAA MNHLIDRRID GLMARTYNRP LPKGKVPVSH AATFAALLAL LGFACLYWLV
NPLTAWLTLA SLLGYAVVYT AYLKRATPQN IVIGGLAGAM PPLLGWTAVT NDFHGHGLLL
VIIIFAWTPP HFWALAIHRK ADYAKVDIPM LPVTHGVAFT KTCIFLYTIL LALACLLPVL
VGMSGALYLL GSTLLSIGFI YKAWQLKYHE TPGMAMDVFR FSIYHLMLLF ILLLVDHYI
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