| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3439 |
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| Symbol | |
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| ID | 4605686 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 4069725 |
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| End bp | 4071977 |
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| Gene Length | 2253 bp |
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| Protein Length | 750 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639782859 |
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| Product | isoquinoline 1-oxidoreductase, beta subunit, putative |
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| Protein accession | YP_929311 |
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| Protein GI | 119776571 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAGT TTACTGCCAT TGAAAACTTC AGCCGCCGCG ATGTGCTCAA ACTCTTTGGT
GCCTCGGGCG GCGCCCTGAT GCTGGGGGCT TCGGGCCTCG GCTGGAGCCC CATGCTGGCG
GCGCAAACCG CCGCTTTTGG CGATGAACAG CGGCTCAACC TTTTCATCGC CATCGGCGAA
GACAACCGGG TCTATCTCAC CTGCCACCGC TCAGAGATGG GCCAGGGCAT ACGCACAGGT
ATTGTGCAGG TTCTGGCCGA CGAGCTGGAA GCCGACTGGG ACAAGGTCGT CGTAGTGCAA
GGTCTCGCGG ACAAACGCTA CGGCAGCCAA AACACCGATG GCAGCCGCAG TATCCGCAAA
GGCTTCGATA AGATGCGCGA GATGGGCGCC ATGGCAAGAC ACATGCTGGA GCAGGCTGCC
GCCGAGAGCT GGCAGGTGCC TGTAAGCGAG GTCTATGCCA AGGCCCACGC AGTACATCAC
AAGGGCAGCG ACAAACGCTT AAGCTATGGC GAGCTCGCCA TGGCCGCCGC CAAACTGCCC
ATGCCGGATG CCAAAACCCT TACCCTCAAA ACCCCGGATA AGTTCACCCA AATCGGCAAA
GGACACACCA TTGTCGACAT GGACGACATG CTGGGTGGCC GCGCCATCTA TGGCGCCGAC
AACCGCCCCG AGGGGCTGGT ATACGCCGTC ATAGCCCGTC CACCAGTGTT TGGCAGTCAG
CTTGAGTCCT TGGATGACAG CGCCGCCCGC AAGGTGGCGG GTGTGCTGGA TATTGTCACC
CTACCGGTAC CCAAAGGCGC ACCGGCGTTT CAGCCGCTGG GCGGCGTGGC CGTGGTGGCC
AGCAATACCT GGAGTGCGTT GGAAGGCCGA AAAGCCCTCA AGCTCAGTTG GAGTAAAAGT
GCCAACGACA CCCATAACAG CAAGGCTTAT CTCGATACCC TCAAACAAAG GGTGCAGGAG
CCTGGTAAAG TGGCCCGAGA GCTTGGCAGC CAACCTGCCA GCTGGCCAGA GGACAAGATG
GTCAGCGCCA CATACACTGT GCCCTATCTT GCCCACGCGC CCATGGAGCC ACCGGCGGTG
ATTGCCAGCG TGGATAAAAA TGGCTGTGAG CTGTGGGCCA GCAGCCAAAC GCCCCAAAGC
ACTCAACAGA ATGTGGCTGG CATGCTGGGT ATCGACGAAG ACAAGGTGAA GGTAAACGTG
ACCTTGCTCG GCGGCGGTTT TGGTCGCAAG TCCAAGCCGG ATTTCAGTGT CGAAGCCGCG
TTTATTTCCA GCAAAATCAA CAAACCTGTG CTGGTGCAAT GGAGCCGGGA AGACGAACTC
AGAAACGGTT ATCTGCACGC CATCAGCGCC CAGTACTATC AGGCCTGCAT CGATGAAAAG
GGCAAGGTGC AGGCGATGTT GTCGCGCACT GCCTTCCCCT CCATCGGCAG CACCTTCGAC
AGTGCTGTGG ATACCCCGCA GCCGTTCGAA CTGGACCTGG GCTTTACCGA TATCCCCTGG
GATATCAATG CCGTGCGCTG CGAAGCCGTC AAGGCCGAAA CCCACACCCG CATCGGTTGG
TTAAGGTCGG TAAGCAACAT TCAGCACGGC TTTGGGGTGG GCAGCTTTGT GGACGAACTC
GCCATTGCCA ATGGTAAATC CTGCACCGCC CAATGGCGGG AACTACTCGG CAAGGCGCGG
GTTGAAAACT TTGCCAATCA AGGCTTTGAA TATGGCAACT ATGGTGAAGA GCAGAGCCGT
CATCCGGTGG ATGTGGGCCG CTACCTTAAG CTGATTGACC GCGCCGAAGC GCTGACGGCA
CAAAAACCCG CCGGCAAAAA CGAAGGTTGG GGCTTTGCCA TTCACCGCAG CTTTGTTGCC
TATGCCGCCG TGGCCATCAA GGTACGACTT GAAGGTGACA AACTCACCGT GGTGGACGCC
ATCGCCCTGA TGGATGCGGG CACCGTGGTT AACCCCGACC GGGTGGCCGC CCAGATGGAA
GGCGCAGTCG TGTTTGGCTT AAGCCTTGCG CTCTTTGGTG AAATCGATTT CGACCAGGGC
GCCGTGACCC AGTCAAACTT CCATGACTAC CCGCTGCTCA GGCTGCCACA TTGCCCGCCA
ATTGCCACCG AAATCATCGC CTCCAGCGCC GTGCCCGGCG GCGTGGGTGA GCCCGGCGTG
CCACCGGTCG CCCCGGCACT GACCAACGCC ATTGTGGCAG CCGGTGGCAA ACGGTATCGT
GAACTGCCGC TGTCGAAGCA CCTTAAACTC TAA
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| Protein sequence | MSKFTAIENF SRRDVLKLFG ASGGALMLGA SGLGWSPMLA AQTAAFGDEQ RLNLFIAIGE
DNRVYLTCHR SEMGQGIRTG IVQVLADELE ADWDKVVVVQ GLADKRYGSQ NTDGSRSIRK
GFDKMREMGA MARHMLEQAA AESWQVPVSE VYAKAHAVHH KGSDKRLSYG ELAMAAAKLP
MPDAKTLTLK TPDKFTQIGK GHTIVDMDDM LGGRAIYGAD NRPEGLVYAV IARPPVFGSQ
LESLDDSAAR KVAGVLDIVT LPVPKGAPAF QPLGGVAVVA SNTWSALEGR KALKLSWSKS
ANDTHNSKAY LDTLKQRVQE PGKVARELGS QPASWPEDKM VSATYTVPYL AHAPMEPPAV
IASVDKNGCE LWASSQTPQS TQQNVAGMLG IDEDKVKVNV TLLGGGFGRK SKPDFSVEAA
FISSKINKPV LVQWSREDEL RNGYLHAISA QYYQACIDEK GKVQAMLSRT AFPSIGSTFD
SAVDTPQPFE LDLGFTDIPW DINAVRCEAV KAETHTRIGW LRSVSNIQHG FGVGSFVDEL
AIANGKSCTA QWRELLGKAR VENFANQGFE YGNYGEEQSR HPVDVGRYLK LIDRAEALTA
QKPAGKNEGW GFAIHRSFVA YAAVAIKVRL EGDKLTVVDA IALMDAGTVV NPDRVAAQME
GAVVFGLSLA LFGEIDFDQG AVTQSNFHDY PLLRLPHCPP IATEIIASSA VPGGVGEPGV
PPVAPALTNA IVAAGGKRYR ELPLSKHLKL
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