Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_3433 |
Symbol | |
ID | 4605680 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 4062455 |
End bp | 4063816 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639782853 |
Product | sensor protein CpxA |
Protein accession | YP_929305 |
Protein GI | 119776565 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0911326 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.239328 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACACCC AAACCCTGCC CAATCGCCTC TTTATCAAAC TGCTGCTCGG TTTCTGGCTA TGCAGCTCTG TGGTGCTGGT TGCCGTAGGC AGCCTGCCAC TGCTGCAACA GCAGCGGGAA TCCACCCCCA TTCCCAAAGA GCTGCAACAG ACTCTGGATA AGATTGCCAG GGCGATTGAG CGGGAGCCTG AACTGATGGA GCCAGAGCGG ATGCGGCGCT GGGAGCGCTC GCGTCACGCC GACGGCAAGC CCATGCGGGT ATTTATCACC AATGAGGAAG GCCGCATTCT CGGCGAGCGC CAACCCCGCT CTCTGCGTAA ATTTATCCTG CTCGCCGAAG AAGCCGAGCG CCCCATCATG TATCAGTTCC GCGATGAAAT GGTGTTTGGC CCCAAGGAGT TCCATGTCGA TGGTAAGGAA TACCACCTCT ATGGCCGGGT GCCAGGGCAG CATCCACGGC CACTGTTCCT GTTTTTTATC GAGCACAAGT TGCTGACACT GGGGCTCGCG GTGTTGGTCT CGGGGCTCTT GTGCGGCCTG CTGGCATGGC ACCTTGGCAG GCCCCTTAAG ATGTTGAAAC AAAGCGCCGA TGCCTTGGCA CGGGGCAACC TTGGCAGCCG GGTCGATGAA GCCACCCTGA ATCGCCGGGA TGAGTTGGGC CAGCTGGGCC ATGCCTTCAA CGCCATGGCC GAAGCCATTG AGCAGCAGGT CAACAATCAG CAGCGACTGA TGGGGGACAT CAGCCACGAG CTGCGCACCC CCCTGACCCG GCTGCAGCTG GCGCTGGCAT TGGCACGCAA GCGAGGTCAG GACAGTAATG AGCTAAACCG TATTGCCCAC GAGGCCGAGC AGCTCGATGC CCTGATAGCC GAGCTGTTGA CTCTCTCCCG GGTGACCATG GGCGCCACCG AGGCCAAAGT TGACATCGAA CTTGCCGAGA CCCTCGGCCA GGTATTGGAT GATGCGGAGT TTGAAGCCAG CGAATGCGGC AAGCATCTGG CCATTGAAAT GGACGACAAC CTGCTGTTAA GCCACACCCC CAAGTTATTG GCACGGGCGG TGGAAAATTT GCTGCGTAAC GCCATCCGCT ACGCCAGGCT GCAGGTCAGT CTGACTGTGA CAGACACTCA GGACCGCATT GAAATTCAAA TTTGTGATGA TGGCCCCGGC GTGGCTGACG CCGAACTCGA AGCCATCTTC CGTCCTTTCT ATCGCACCGA TAAGTCCCGC GAGCGTGAGA GCGGCGGTTG GGGGCTTGGC CTCGCCATTA CCGCGGCGGC CATCGAAGCC CAGGGCGGCA GCATCAGCGC CCAAAACAGG CCAACCGGCG GCCTGTGCGT AACGATTTGC TTGCCGCGTT AA
|
Protein sequence | MNTQTLPNRL FIKLLLGFWL CSSVVLVAVG SLPLLQQQRE STPIPKELQQ TLDKIARAIE REPELMEPER MRRWERSRHA DGKPMRVFIT NEEGRILGER QPRSLRKFIL LAEEAERPIM YQFRDEMVFG PKEFHVDGKE YHLYGRVPGQ HPRPLFLFFI EHKLLTLGLA VLVSGLLCGL LAWHLGRPLK MLKQSADALA RGNLGSRVDE ATLNRRDELG QLGHAFNAMA EAIEQQVNNQ QRLMGDISHE LRTPLTRLQL ALALARKRGQ DSNELNRIAH EAEQLDALIA ELLTLSRVTM GATEAKVDIE LAETLGQVLD DAEFEASECG KHLAIEMDDN LLLSHTPKLL ARAVENLLRN AIRYARLQVS LTVTDTQDRI EIQICDDGPG VADAELEAIF RPFYRTDKSR ERESGGWGLG LAITAAAIEA QGGSISAQNR PTGGLCVTIC LPR
|
| |