| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3414 |
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| Symbol | |
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| ID | 4605661 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 4040377 |
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| End bp | 4042410 |
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| Gene Length | 2034 bp |
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| Protein Length | 677 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639782834 |
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| Product | aminopeptidase-like protein |
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| Protein accession | YP_929286 |
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| Protein GI | 119776546 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2234] Predicted aminopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.543357 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACGA AAAAGCGGCT GCTGAGTCTG GCACTCTTGC TGTGCCCCCT CGGCGCCATG
GCGGACGAGC TGTGGATTAT GACCGACAAG GACGCCGGAT ACAGTCTGCA AAGCCTGCTG
CAAAGGCATA ACCTCCAGCC TCAGCTGCGG GAAAGCCATG GCAAACTCAT TACGCGTCTC
AATGAAGATA AGCTGCTGGA ACTGAGCGCC CTGATGCACA AGGAGCACAA TCGCTGCGGC
GGTTTCAGTG TGCATGCCAG CGAGGCCGAT GCCCTGGCCG CCAGTCTGGT GCCAGTGAGC
CAGGCGACGT TCAGTTTCCC CGGCGAGCCC AATCAGGCGG CGCGGGTGGC GGACATTCTG
CCAAGACTTA TGGCCAGCAA TATCAAGGAT ACCGTCACCA GCCTCGAGAC CTTCACCAAC
CGCTACTACA CCACCAGTCA CGGTGAAAAT GCTGCCAATT GGGTAAAAGA CAACTGGGCA
GCGTTGGCTA CCGGTAACAG CTGGGCCAAT GCTGCGGTGT ATGACCATGC CGACTGGCGG
CAGGACTCAG TCGTCCTTAC CCTTACGGGC AGTGAAGCGC CGGATGAGGT GGTGATCCTC
GGCGGCCACC TCGACTCCAT CAATGGCTAC ACCACAGAAA CCACCCGCGC CCCCGGCGCC
GACGACAATG CCTCGGGCAT GGCCACCATC ACCGAGGTCA TTCGTGCCTT TATGAGTCAG
GGCCAGCCCA AGCGCACCAT CAAGTTTATC GGCTATGCCG CTGAGGAAGT GGGTCTGCGT
GGCAGCGCCG AGATAGCCGC ACAGGCCCGC AGCCAGGGGC AAAATGTGGT GGCGGTTATG
CAGCTGGATA TGACCGGCTT TAATGGCAGC ACCGAAGACA TAGTGCTGAT GCAGGACTAC
ACAGATTCGG GCCTGAATCA GTTTTTGATT AAGCTGATGG ATACCTACCA CACCGAAATC
CGCTATGGCC TGGATGTGTG CGGCTATGGC TGTTCGGATC ATGCTTCCTG GCACAATCAG
GGCTACCCTG CAGCCATGCC GTTCGAGTCG CGCTTCAACG ACTACAACCC CCATATTCAC
ACCGCTCAGG ACACCCTGGA CAAACTCGAC CCCACCATGG AGCACGCACT CAACTTTGCC
AAGCTGGCCT CGAGCTATCT GGTGGAGCTC AGCTTTAACA CCGGTGGCAC CGGCCCCGAA
ACCGGCGAGC TTGAAAATGG CGTGGCCCTC ACCGGGCTCA GCGCCGCCAA GGATGCCCAG
AGCTATTTCA CCCTGGCGGT ACCGGCCGAT GCCGAGAATC TGCGCTTTGT CACCGCCGCG
AACAATGGCG ATGCCGATCT GTACGTGAAG TTTGGCGCGC CGCCGTCGAC CTCAGATTTT
GACTGCCGCT CCTGGAATAA CGGCAGCAAT GAGAGCTGCG ATCTGGCCCA GGCTACCGAG
GGCACCTGGC ATGTGATGCT GAAAGCCTAC AACGCTTACT CTGATTTAAG CCTCACCGGC
AGCTTTGATG TCTCGACCCC AACCCCCAAC CAGCCTCCGG TGTCCAACTT CAGCGTCAGC
TTTAACGGTG CAACCGGCCA GTTTGTCTCC AGCGCCAACG ACAGCGATGG TCAACTGGTA
AGCTGGCAGT GGAGTTTTGG TGATGGCAGC AGCGCCAGCG GTGCCAATGT CAGCCACACT
TACAGCCAGT CTGGCCGTTA CACGGTTTCG CTTACTGTCA CCGATGATGA TGGCGCCAGT
GCAACCAGCA GCCAGAGCGT CGATATGACG GTGCCAGAGC CGCCACAGGG CGACATTGAG
CTCACGGTAA CCAAGGCCAC CAAATCGCGT CTTGGCAGTG TTTATGTGGC GCTGAGTTGG
GACACTGGCT CCGGCGATTA CCGGGTGCTG CGTGATGGCG TACAAATTGG CACAAGCAGC
CGCAGCAGCT ATACCGACCG CTTTAAAGTC GGCAAAAATG AGGCTGTCTC GGTAAGCTAT
CAGGTATGTG ACAACAGCAA TGCCTGCTCG CAAATGGTGC AGGTAAATCT GTAA
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| Protein sequence | MKTKKRLLSL ALLLCPLGAM ADELWIMTDK DAGYSLQSLL QRHNLQPQLR ESHGKLITRL
NEDKLLELSA LMHKEHNRCG GFSVHASEAD ALAASLVPVS QATFSFPGEP NQAARVADIL
PRLMASNIKD TVTSLETFTN RYYTTSHGEN AANWVKDNWA ALATGNSWAN AAVYDHADWR
QDSVVLTLTG SEAPDEVVIL GGHLDSINGY TTETTRAPGA DDNASGMATI TEVIRAFMSQ
GQPKRTIKFI GYAAEEVGLR GSAEIAAQAR SQGQNVVAVM QLDMTGFNGS TEDIVLMQDY
TDSGLNQFLI KLMDTYHTEI RYGLDVCGYG CSDHASWHNQ GYPAAMPFES RFNDYNPHIH
TAQDTLDKLD PTMEHALNFA KLASSYLVEL SFNTGGTGPE TGELENGVAL TGLSAAKDAQ
SYFTLAVPAD AENLRFVTAA NNGDADLYVK FGAPPSTSDF DCRSWNNGSN ESCDLAQATE
GTWHVMLKAY NAYSDLSLTG SFDVSTPTPN QPPVSNFSVS FNGATGQFVS SANDSDGQLV
SWQWSFGDGS SASGANVSHT YSQSGRYTVS LTVTDDDGAS ATSSQSVDMT VPEPPQGDIE
LTVTKATKSR LGSVYVALSW DTGSGDYRVL RDGVQIGTSS RSSYTDRFKV GKNEAVSVSY
QVCDNSNACS QMVQVNL
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