| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3378 |
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| Symbol | |
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| ID | 4605625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 4006870 |
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| End bp | 4007697 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639782798 |
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| Product | acyltransferase family protein |
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| Protein accession | YP_929250 |
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| Protein GI | 119776510 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
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| TIGRFAM ID | [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGAGC ACACCCAAAA GCTTGCGCGC CGCTCGCCCT GTCAGCACCG ACTGACCGGA
CTGGCCTATG TGCCGCGCTG GCTGGGTGGC ATGCTGTGCT ACATCTGTTT TGGCCTCGGC
GGTCTGCTAA GCTCGCTGAC TATCTTACCG CTGCTGAAAT ACTGGCCCGG CAAACCCGAG
GTTCGCATCA AGCGGGTACA AAAAGCCGTG CACCTGATGT TTCGCGGCTT TGTGCGCATG
TTGTCGGCAG CTGGCGTGAT AAAACTGGAA ACCAAAGAGG TGGAGCGGCT CGCCAATGCC
GAAGCCATGC TGGTGATTGC CAACCACCCC ACCCTGATTG ATGTGGTGGT GTTGATAAGC
CTGATGCCCA ACGCAGGTTG TATCGTAAAA CAGGGGCTTT GGCGCAACCC TTTTATGCGT
GGCGTGGTGT CGGCGGCAGG TTATATCCCC AATCGCGGCG CCGAGCTGCT GCTGGATGAT
TGCCGCGACG TACTCAGCCG TGGTACCAAT CTGATTATCT TCCCCGAAGG CACCCGTACC
GTGCTTGGCG AGCAGATAAA CCCCTTTGCG CGTGGCGCGG CCAATATCGC CCTGCGTACC
GGCAGTGACA TACTTCCTGT GTTGCTGCAC ACCAAGCCCC CTGGTCTGAC CAAACAGGAC
CCCTGGTGGG AAATTCCCCG GCGCACCATT GGCATGACGG TAGAGGTGGG AACACCCATA
TCCGCCATGG ACTACAAGGC CGAGGAAGGA GGAGATGCCA GGATGGCGCG GATACTGACC
AGGGAAATGG AAAATTATTA TAAACAAAGA CTTGAAATAG AATTATGA
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| Protein sequence | MTEHTQKLAR RSPCQHRLTG LAYVPRWLGG MLCYICFGLG GLLSSLTILP LLKYWPGKPE
VRIKRVQKAV HLMFRGFVRM LSAAGVIKLE TKEVERLANA EAMLVIANHP TLIDVVVLIS
LMPNAGCIVK QGLWRNPFMR GVVSAAGYIP NRGAELLLDD CRDVLSRGTN LIIFPEGTRT
VLGEQINPFA RGAANIALRT GSDILPVLLH TKPPGLTKQD PWWEIPRRTI GMTVEVGTPI
SAMDYKAEEG GDARMARILT REMENYYKQR LEIEL
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