Gene Sama_3368 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3368 
SymbolaroK 
ID4605615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3994250 
End bp3994765 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content48% 
IMG OID639782788 
Productshikimate kinase I 
Protein accessionYP_929240 
Protein GI119776500 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000011554 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAA AACGAAATAT TTTTCTGGTA GGCCCTATGG GCGCGGGCAA GAGCACCATA 
GGCCGTCATC TGGCTCAAAT GCTGCACTTG GAATTCCATG ACTCTGACCA AGAAATTGAA
AGCCGTACTG GGGCTGACAT TGCTTGGGTA TTTGATGTTG AAGGTGAAGA AGGTTTCCGT
CGCCGCGAGG CGCAGGTGAT AGCCGACTTA ACCGAAAAGC AGGGTATTGT GCTGGCAACC
GGTGGTGGTT CAGTACAAAG CAAAGATATA CGTAACTATC TGTCCGCAAG AGGGATTGTG
GTATATCTCG AGACAACCAT AGATAAGCAG GTTGCTCGTA CCCAAAGAGA CAAACGTCGT
CCACTTTTGC AGGTTGATGA TCCTCGTTCA GTGCTAGAGA CACTGGCCGA GAGCCGTAAT
CCACTCTATG AAGAAATCGC TGATGTGATT GTCAAAACCG ATGACCAAAG TGCCAAGGTC
GTTGCCAATC AAATCATCGA ACAGCTGGGA TTCTGA
 
Protein sequence
MAEKRNIFLV GPMGAGKSTI GRHLAQMLHL EFHDSDQEIE SRTGADIAWV FDVEGEEGFR 
RREAQVIADL TEKQGIVLAT GGGSVQSKDI RNYLSARGIV VYLETTIDKQ VARTQRDKRR
PLLQVDDPRS VLETLAESRN PLYEEIADVI VKTDDQSAKV VANQIIEQLG F