Gene Sama_3318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3318 
Symbol 
ID4605565 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3947493 
End bp3949019 
Gene Length1527 bp 
Protein Length508 aa 
Translation table11 
GC content59% 
IMG OID639782738 
ProductNa+/H+ antiporter 
Protein accessionYP_929190 
Protein GI119776450 
COG category[C] Energy production and conversion 
COG ID[COG1757] Na+/H+ antiporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.285563 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGTGA CTGACTTGCT GGAACTTATT CCTCTGATAC TAACCCTGGT GCTGGCTTTG 
CTGCTCAGGC GCACACTTAT TGCACTTGGC GCAGGCGTTG TGCTGGGCGC GTTGATTCTG
AATGATTTTT CACCGGTAAC CAGCCTTAAA TACCTACTTA ATACCCTGAC GTCGCAGTTT
TATCAGCAGA GCCAATGGCA GTGGTGGCAT CTCAACGTGC TCTTTGCCAT GTTGCTGCTG
GGGATAATGA CCAGTTTGCT GGGCCGAAGC GGCGCCGTGG ACGAGTTTGG CCACTGGCTG
TCGGCACGGG TGCACAGTCG CCGTCAGGCC AGAATGGGTA TCATTGGCCT GGGTTTTCTG
GTGTTTATCG ACGGTATCTT CAGCTGTTTG GCCGTGGGCA GTGTCGGGCG CCCTATTGCG
CGCCAATATG GCATGTCACC GGCGCAGCTC TCCTACATGG TCGACACCAC TGCGTCTCCC
TTATGCTCAC TGGTGCCCGT GGCCAGCTGG GGCCCCTATG TGATGGCGCT TTTGGCCGCT
ATCAGCTTTT TGCCTGTCTC GGCGCTGGAC GCCTTTATCG CCATCGCCTC TGTTAATTTT
TATGCGGTAT CGGCCCTGGT ACTGGTGGGG CTGGGCAGCC TCTTTAACTG GGGGTGGTCT
GAGCATGCCG TGGATGCTAC AGAGCAGGCT GCTGGTGTTG ATAATGCCCA TCAACAAGCA
CAGCGGCCGA AAACCCCTTC TCCCTGGCCA CTGATGCTGC CCCTGCTGGG GTTGCTGGTT
GGGGCCTTGG CGTTCACCCT GGCCTCAGGC GTCACACTGG CCAAGGAGCC GGGCATGGCT
GCCTGGCTGG CAGCTGCGGA TGTAGGTGCT GCCATGCGCA ATGCCAGTTT GACGGCAGTG
GTGCTGGCGG CCTTGATGGC GCTTTGGTGT GGGCGCGGGC TGCATCCACT GATGATAGAT
ATGTTGGTGG GGCTCAGGTC CATGGCGCTG GCGGTGGGCA TTTTGCTGCT TACCTGGATG
ATAGGCGCTC TTATCAAAGA TCTGGGCAGC GCCGCGCGCA TTTCGGCCCT CGCCAATGAT
CTCTTGTCAC CCAGTCTGCT GCTTGCCGGC ATCTTTGCCC TCTGCGCCAT TATGGCCTTT
GCCACCGGCA CCAGTTGGGG CACCTTTGCC ATCATGATCC CCCTCTGTGC TCAGGTGGCG
CAGGGCATGG CCCCTGAGCT TTTGTTACCT GCGCTGGCCG CGGTGATGGC AGGCTCTGTG
TTTGGTGACC ACTGCTCGCC GATATCCGAC ACCAGTATTC TCAGTGCCAC CGCCAGTGGT
GCGGCCGTAC ATGAGCACGT GACCACCCAG TTGCCCTTTG CCCTGATAGC GGCCATCGCG
GCCTTGTGTG GCTTTCAGCT GCTTAATCTG GGGGCGTCCT GGTGGCTGGC CTGGGCAATG
ACGCTGATGG TGGGAATTGG GCTGCTGTTG CTTTGGCAGC TTAAGCAAAG CAGTGGAAAT
TTACTCAAGC AGGATGGACA GGCTTAG
 
Protein sequence
MDVTDLLELI PLILTLVLAL LLRRTLIALG AGVVLGALIL NDFSPVTSLK YLLNTLTSQF 
YQQSQWQWWH LNVLFAMLLL GIMTSLLGRS GAVDEFGHWL SARVHSRRQA RMGIIGLGFL
VFIDGIFSCL AVGSVGRPIA RQYGMSPAQL SYMVDTTASP LCSLVPVASW GPYVMALLAA
ISFLPVSALD AFIAIASVNF YAVSALVLVG LGSLFNWGWS EHAVDATEQA AGVDNAHQQA
QRPKTPSPWP LMLPLLGLLV GALAFTLASG VTLAKEPGMA AWLAAADVGA AMRNASLTAV
VLAALMALWC GRGLHPLMID MLVGLRSMAL AVGILLLTWM IGALIKDLGS AARISALAND
LLSPSLLLAG IFALCAIMAF ATGTSWGTFA IMIPLCAQVA QGMAPELLLP ALAAVMAGSV
FGDHCSPISD TSILSATASG AAVHEHVTTQ LPFALIAAIA ALCGFQLLNL GASWWLAWAM
TLMVGIGLLL LWQLKQSSGN LLKQDGQA