Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_3318 |
Symbol | |
ID | 4605565 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 3947493 |
End bp | 3949019 |
Gene Length | 1527 bp |
Protein Length | 508 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639782738 |
Product | Na+/H+ antiporter |
Protein accession | YP_929190 |
Protein GI | 119776450 |
COG category | [C] Energy production and conversion |
COG ID | [COG1757] Na+/H+ antiporter |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.285563 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGTGA CTGACTTGCT GGAACTTATT CCTCTGATAC TAACCCTGGT GCTGGCTTTG CTGCTCAGGC GCACACTTAT TGCACTTGGC GCAGGCGTTG TGCTGGGCGC GTTGATTCTG AATGATTTTT CACCGGTAAC CAGCCTTAAA TACCTACTTA ATACCCTGAC GTCGCAGTTT TATCAGCAGA GCCAATGGCA GTGGTGGCAT CTCAACGTGC TCTTTGCCAT GTTGCTGCTG GGGATAATGA CCAGTTTGCT GGGCCGAAGC GGCGCCGTGG ACGAGTTTGG CCACTGGCTG TCGGCACGGG TGCACAGTCG CCGTCAGGCC AGAATGGGTA TCATTGGCCT GGGTTTTCTG GTGTTTATCG ACGGTATCTT CAGCTGTTTG GCCGTGGGCA GTGTCGGGCG CCCTATTGCG CGCCAATATG GCATGTCACC GGCGCAGCTC TCCTACATGG TCGACACCAC TGCGTCTCCC TTATGCTCAC TGGTGCCCGT GGCCAGCTGG GGCCCCTATG TGATGGCGCT TTTGGCCGCT ATCAGCTTTT TGCCTGTCTC GGCGCTGGAC GCCTTTATCG CCATCGCCTC TGTTAATTTT TATGCGGTAT CGGCCCTGGT ACTGGTGGGG CTGGGCAGCC TCTTTAACTG GGGGTGGTCT GAGCATGCCG TGGATGCTAC AGAGCAGGCT GCTGGTGTTG ATAATGCCCA TCAACAAGCA CAGCGGCCGA AAACCCCTTC TCCCTGGCCA CTGATGCTGC CCCTGCTGGG GTTGCTGGTT GGGGCCTTGG CGTTCACCCT GGCCTCAGGC GTCACACTGG CCAAGGAGCC GGGCATGGCT GCCTGGCTGG CAGCTGCGGA TGTAGGTGCT GCCATGCGCA ATGCCAGTTT GACGGCAGTG GTGCTGGCGG CCTTGATGGC GCTTTGGTGT GGGCGCGGGC TGCATCCACT GATGATAGAT ATGTTGGTGG GGCTCAGGTC CATGGCGCTG GCGGTGGGCA TTTTGCTGCT TACCTGGATG ATAGGCGCTC TTATCAAAGA TCTGGGCAGC GCCGCGCGCA TTTCGGCCCT CGCCAATGAT CTCTTGTCAC CCAGTCTGCT GCTTGCCGGC ATCTTTGCCC TCTGCGCCAT TATGGCCTTT GCCACCGGCA CCAGTTGGGG CACCTTTGCC ATCATGATCC CCCTCTGTGC TCAGGTGGCG CAGGGCATGG CCCCTGAGCT TTTGTTACCT GCGCTGGCCG CGGTGATGGC AGGCTCTGTG TTTGGTGACC ACTGCTCGCC GATATCCGAC ACCAGTATTC TCAGTGCCAC CGCCAGTGGT GCGGCCGTAC ATGAGCACGT GACCACCCAG TTGCCCTTTG CCCTGATAGC GGCCATCGCG GCCTTGTGTG GCTTTCAGCT GCTTAATCTG GGGGCGTCCT GGTGGCTGGC CTGGGCAATG ACGCTGATGG TGGGAATTGG GCTGCTGTTG CTTTGGCAGC TTAAGCAAAG CAGTGGAAAT TTACTCAAGC AGGATGGACA GGCTTAG
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Protein sequence | MDVTDLLELI PLILTLVLAL LLRRTLIALG AGVVLGALIL NDFSPVTSLK YLLNTLTSQF YQQSQWQWWH LNVLFAMLLL GIMTSLLGRS GAVDEFGHWL SARVHSRRQA RMGIIGLGFL VFIDGIFSCL AVGSVGRPIA RQYGMSPAQL SYMVDTTASP LCSLVPVASW GPYVMALLAA ISFLPVSALD AFIAIASVNF YAVSALVLVG LGSLFNWGWS EHAVDATEQA AGVDNAHQQA QRPKTPSPWP LMLPLLGLLV GALAFTLASG VTLAKEPGMA AWLAAADVGA AMRNASLTAV VLAALMALWC GRGLHPLMID MLVGLRSMAL AVGILLLTWM IGALIKDLGS AARISALAND LLSPSLLLAG IFALCAIMAF ATGTSWGTFA IMIPLCAQVA QGMAPELLLP ALAAVMAGSV FGDHCSPISD TSILSATASG AAVHEHVTTQ LPFALIAAIA ALCGFQLLNL GASWWLAWAM TLMVGIGLLL LWQLKQSSGN LLKQDGQA
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