| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3303 |
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| Symbol | |
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| ID | 4605550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3929286 |
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| End bp | 3929960 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639782723 |
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| Product | response regulator receiver protein |
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| Protein accession | YP_929175 |
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| Protein GI | 119776435 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.206004 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGCCTGT TACTGGTTGA AGACGATGCG GCCCTGGCCG CCAATTTGGG GGATCACCTC
AGAGAAAACC TCTACAGCGT GGATGTGGCC GCCGACGGCG AGCTGGGGCT GTTTCAGGGG
CTGGAGTACG ACTACGACGC CGCCATTATC GACGTAGGCC TGCCCAAGCT CGATGGCATC
AGTCTGGTCA CCAAGCTCAG GGCCGAAGGC CGTGAGTTCC CCATTCTTAT CCTCACCGCC
CGGGACAGCT GGGAAGACAA GGTCGAAGGC CTGGATGCCG GTGCCGACGA CTACCTCACC
AAGCCGTTCC ATCCCCGGGA ACTGGCCTCG CGCTTAAAGG CACTGATTCG CCGCAGCGCC
GGTAAGGCCA GCCCCGTTAT CGAAAACGGC CCTGTTACCC TCAATACCGC CAGCGGCGAA
GTATTGCTTA ACGGCGAGCG GGTCAGCCTG TCGGCTTCCG AGTTCCGGCT GCTGCAATTT
TTGATGATGC ACCGGGGCGA GGTGCAATCC AAAACCATGC TCACCGAGCA TATTTACGAT
CAGGACTTCG ACCTCGACTC CAACGTGATT GAAGTCTTTA TCCGCCGGTT GCGTAAAAAG
CTCGACCCGG ACAACGAGCT CGGGCTGATT GAAACCCTGC GCGGCCAGGG CTACCGGCTG
AACCTGCTGA CCTGA
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| Protein sequence | MRLLLVEDDA ALAANLGDHL RENLYSVDVA ADGELGLFQG LEYDYDAAII DVGLPKLDGI
SLVTKLRAEG REFPILILTA RDSWEDKVEG LDAGADDYLT KPFHPRELAS RLKALIRRSA
GKASPVIENG PVTLNTASGE VLLNGERVSL SASEFRLLQF LMMHRGEVQS KTMLTEHIYD
QDFDLDSNVI EVFIRRLRKK LDPDNELGLI ETLRGQGYRL NLLT
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