Gene Sama_3292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3292 
Symbol 
ID4605539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3912502 
End bp3912981 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content58% 
IMG OID639782712 
Producthypothetical protein 
Protein accessionYP_929164 
Protein GI119776424 
COG category[S] Function unknown 
COG ID[COG1683] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.487222 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAGA TTTTGGTGAG CGCCTGTCTG CTGGGCGAAG CGGTGCGATA CGATGGTAAA 
GATAATTTGG TGGAGTCGTC CCTGTGGCAA GGCTGGCAGC AACAGGGACG CTTGGTTGGC
ATCTGCCCCG AGTGCGCCGG CGGTTTGCCC ACGCCCCGCC CGCCGGCAGA AATACAAGCG
CCAGACCCAA AGCAGGCCAT TCGGGTCATC ACAGAGACGG GGGAGGATGT GACAGATGCC
TTCGTGCGGG GCGCTGAAGC TGCTTTAAGG CTTGCCCGAA AGGAAAATAT TCGTTTTGCC
ATTCTCAAAG CCCGCAGCCC GTCCTGCGGC AAGGGGCTGA TTTACGATGG CAGCTTTTCC
CGTACCCTGA GTGAGGGCGA CGGCATTACC GCAGCGCTGC TGAGTCAGCA CGGCATAGAA
GTCTTTACCG AGTATCAGCT GCAACAATTG ACTGAGCGGC TGGTGCAGAT TGGTGATTGA
 
Protein sequence
MEKILVSACL LGEAVRYDGK DNLVESSLWQ GWQQQGRLVG ICPECAGGLP TPRPPAEIQA 
PDPKQAIRVI TETGEDVTDA FVRGAEAALR LARKENIRFA ILKARSPSCG KGLIYDGSFS
RTLSEGDGIT AALLSQHGIE VFTEYQLQQL TERLVQIGD