Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_3292 |
Symbol | |
ID | 4605539 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 3912502 |
End bp | 3912981 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639782712 |
Product | hypothetical protein |
Protein accession | YP_929164 |
Protein GI | 119776424 |
COG category | [S] Function unknown |
COG ID | [COG1683] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.487222 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAAGA TTTTGGTGAG CGCCTGTCTG CTGGGCGAAG CGGTGCGATA CGATGGTAAA GATAATTTGG TGGAGTCGTC CCTGTGGCAA GGCTGGCAGC AACAGGGACG CTTGGTTGGC ATCTGCCCCG AGTGCGCCGG CGGTTTGCCC ACGCCCCGCC CGCCGGCAGA AATACAAGCG CCAGACCCAA AGCAGGCCAT TCGGGTCATC ACAGAGACGG GGGAGGATGT GACAGATGCC TTCGTGCGGG GCGCTGAAGC TGCTTTAAGG CTTGCCCGAA AGGAAAATAT TCGTTTTGCC ATTCTCAAAG CCCGCAGCCC GTCCTGCGGC AAGGGGCTGA TTTACGATGG CAGCTTTTCC CGTACCCTGA GTGAGGGCGA CGGCATTACC GCAGCGCTGC TGAGTCAGCA CGGCATAGAA GTCTTTACCG AGTATCAGCT GCAACAATTG ACTGAGCGGC TGGTGCAGAT TGGTGATTGA
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Protein sequence | MEKILVSACL LGEAVRYDGK DNLVESSLWQ GWQQQGRLVG ICPECAGGLP TPRPPAEIQA PDPKQAIRVI TETGEDVTDA FVRGAEAALR LARKENIRFA ILKARSPSCG KGLIYDGSFS RTLSEGDGIT AALLSQHGIE VFTEYQLQQL TERLVQIGD
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