| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3275 |
|---|
| Symbol | |
|---|
| ID | 4605522 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | + |
|---|
| Start bp | 3890275 |
|---|
| End bp | 3891057 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639782695 |
|---|
| Product | phosphatidylglycerophosphatase B, putative |
|---|
| Protein accession | YP_929147 |
|---|
| Protein GI | 119776407 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCATA CCCAGGCCCC CCGTTTTGAC CGCAGCATTC GCCCCCTGCT CCTGCTCACC
CTGTGGCTGT TACTGCTGGT ACCTGCCACT GTCCTGACCC TGGCGCAGCT CCCCCTCTTC
CCCTGGATGC CATTGGACGG AGCCACTGCT GAGATTGTCT ATGCCATCAC CTTTACCGGC
ACAGCGCCCT GGGGCGCCAT CAGCGCGGCG GCCGTCATAC TGCTGGCCTT TATTCGTCTG
TCACACCCCC AAGCCATCAA GTTACTGTTG GCGCTGGCGC TCTCACTCGG CAGCAGCCTC
TGGCTCAACG AAAGCCTGAA GACCCACTTT AATGAACCCA GGCCCAATGT ATTGTTCCTG
GCCGAACACA AGCTGCTGGA TACAGATGAC TTTTACCGTC TTCACAAGGG CGATCGCCGC
GATGTGATGA CAGTGCTTTT TGCCAGTAAC GCGTCGGATT TACCGCCCAT GAGCCCCCGC
GTTGCAAACC ACTGGCAGCA AGAGGTGGGG TTGTCGTTTC CGTCGGGGCA CACCCTGTTC
GCCACCATTC TGGCGCTAAC TGCGAGCTGG TTTTTTATCG CTTCAGGACA CTGGATAACC
TGCTCATTTT TAGGCATCTG GGCGCTGGCA ATGGGCGGAT CTCGCATGCT GCTGGGCATG
CACCATAGCC AGGATGTGAT GGCAGCCACG GCGTTGTCAC TGCCGCTGTG CCTATTGGGC
ATATTGTTGG CAAGCTGGCT GGGACCGAAG CTATTCAGGA CTCGCCAGCC CCAATCAGAT
TAG
|
|---|
| Protein sequence | MQHTQAPRFD RSIRPLLLLT LWLLLLVPAT VLTLAQLPLF PWMPLDGATA EIVYAITFTG
TAPWGAISAA AVILLAFIRL SHPQAIKLLL ALALSLGSSL WLNESLKTHF NEPRPNVLFL
AEHKLLDTDD FYRLHKGDRR DVMTVLFASN ASDLPPMSPR VANHWQQEVG LSFPSGHTLF
ATILALTASW FFIASGHWIT CSFLGIWALA MGGSRMLLGM HHSQDVMAAT ALSLPLCLLG
ILLASWLGPK LFRTRQPQSD
|
|---|
| |