| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3267 |
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| Symbol | |
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| ID | 4605514 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3879812 |
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| End bp | 3880378 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639782687 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_929139 |
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| Protein GI | 119776399 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAATA AGCGGGAACA AATTCTCAGA GCAGCCGAAA ACATCATCGC CAACGATGGT
TTACACAATC TGTCGATGCA GAAGCTGGCC AAAGATGCCG GTGTGGCTGC TGGCACCATT
TATCGCTACT TCGCCGATAA AGATGCTCTT ATCGACGAAT TGAGGCGCGA TGTGCTGACT
CAAATCGCCA ACTTTATCCT TGAGGACGCC AGTAAAGGCA GCCTGGAAGA TCGCTTTCGG
CGTATTTGGT TCAACATCAT CCGGCTGGGT GAAACCTGCA CTCTGGAGCG GCTCAACTTC
GAGCAATACA CCCATCTCCC GGGCGCCAAC AGCGAAGAGC ACCGCAAGTT TGAGCGGGAA
ACATTCGCTC CCCTGCACTT ACTCTTTGCC GAGGCAAAGG CCCAGGGACT GATGCTGGAT
ATGGATGACG AACTCTTGTT TGCGCTGGCC TTTGAGCCAG CCGTAGGCCT GTGCAGGCGG
ATGCGCCGCA CCGGTCTGAA CTTTCAACAA AGCGAGCTGG AGCAGGTATG TGACCTGTGC
TGGCGCGCCA TCAAGCCTCA CCAATAA
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| Protein sequence | MDNKREQILR AAENIIANDG LHNLSMQKLA KDAGVAAGTI YRYFADKDAL IDELRRDVLT
QIANFILEDA SKGSLEDRFR RIWFNIIRLG ETCTLERLNF EQYTHLPGAN SEEHRKFERE
TFAPLHLLFA EAKAQGLMLD MDDELLFALA FEPAVGLCRR MRRTGLNFQQ SELEQVCDLC
WRAIKPHQ
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