| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3219 |
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| Symbol | frdB |
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| ID | 4605466 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3811363 |
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| End bp | 3812091 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639782635 |
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| Product | fumarate reductase iron-sulfur subunit |
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| Protein accession | YP_929091 |
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| Protein GI | 119776351 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
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| TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGGCC GCATTCTGAC ATTCAATATT TTCCGTTTCG ACCCACAGGA CGCCGGTGAT
AAGCCCAAAA TGGTCAAGTA CCAGTTGGAA GAAACCAGTG GTATGACCGT GTTCATTGCT
CTCAATAAGC TCCGTCAGGA GCAGGACCCG TCGCTGCAGT TTGACTTTGT GTGCCGCGCT
GGCATTTGTG GCAGCTGCGC CATGGTGATC AATGGTTTCC CCACATTGGC GTGCCGTACC
CTCACAGCAA AATACCCCAA GGGCGAAATC ACTTTGATGC CGCTGCCGGG TTTTGAGCTG
ATTGGTGACC TGTCGGTAAA CACGGGCAAG TTTATGCGTG AGCTGGCCGA GCGCTTGAAG
CTGTGGCTGC ACCCCAAGGG AGACGATCTC AACATCCATC GTCTGGAAGA CCCCATGGAC
CCACAGGAGG CCGCCAGGCT TTATGAACTG GAGCGCTGTG TGGAATGTGG TGTGTGTGTA
TCGGCCTGTG CCACCAAGCA GATGCGCGAC ACCTTTGTGG GCGCTGTGGG CATGATGAAG
ATTGCCCGCT TCGAGCTCGA CAGCCGCGAT GGCCGCAGCG CCGATGACTT CTACCATGTG
ATTGGCAATC AGGATGGGGT GTTTGGCTGT ATGACCCTGC TGGGCTGCCA GGACAATTGC
CCCAAAGATT TGCCCCATAT GCAGCAAATC GCCTATCTGC GCCGCAAGAT GGCTTCGACC
CTGCTGTGA
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| Protein sequence | MSGRILTFNI FRFDPQDAGD KPKMVKYQLE ETSGMTVFIA LNKLRQEQDP SLQFDFVCRA
GICGSCAMVI NGFPTLACRT LTAKYPKGEI TLMPLPGFEL IGDLSVNTGK FMRELAERLK
LWLHPKGDDL NIHRLEDPMD PQEAARLYEL ERCVECGVCV SACATKQMRD TFVGAVGMMK
IARFELDSRD GRSADDFYHV IGNQDGVFGC MTLLGCQDNC PKDLPHMQQI AYLRRKMAST
LL
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