| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3130 |
|---|
| Symbol | |
|---|
| ID | 4605377 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | - |
|---|
| Start bp | 3715245 |
|---|
| End bp | 3716636 |
|---|
| Gene Length | 1392 bp |
|---|
| Protein Length | 463 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 639782546 |
|---|
| Product | PhoH family protein |
|---|
| Protein accession | YP_929002 |
|---|
| Protein GI | 119776262 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1875] Predicted ATPase related to phosphate starvation-inducible protein PhoH |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACAAG ACGACAGAAA GTTGTTTGTA CTGGATACCA ATGTTTTATT GCACGAACCC
TTAGCGATTT ATTCCTTCAA AGAACACGAT GTCATAGTGC CTATGACAGT CCTCGAAGAG
CTGGACCAGA TTAAAGATCG TAAGCGGGAT GTCAGCCGTG ACGCCCGGGT CGCCATCAGG
GCACTGGAAG ATACCCTCGG CGGCGAAACC ACCCCGGAAC AAATTATCGC AGGCGTGCCC
CTGCCGGCCC GCGAAGGCCA CGAAGCCACA GGCACACTCG CCATTTTTCC CGACCATCAG
CTTGAAATGT CCACCGGCGG CCTGCCCGGC GACCATAACG ACAATCGCAT TATCAATACT
GCGCTGCACT TACAAAAACT TCACGCGCCA CGCCCCGTGG TACTGGTAAC CAAAGACATC
AATATGCGCC TTAAGGCCAA GGGCGCCGGT ATCAAGCTGG TAGAAGACTA CCGTACCGAC
CAGCTTATCG ATGATATTCG CTTCTTAACC AAGGGTTTTC ATCAGTTTGA AGGTAACTTC
TGGGAGCATC TGGAAAAGGT GTCCACTACC CGCCATGGCC GCCAGACTAT CCATGAAGTG
CCCCTTAAAG ACCTGGAAGA CGATCATCTC TATATCAACC AATATCTTAT CGACGAAGAA
TCCGATTTCT GTGGCCGGGT GATTTCAAAG GATGATACCC ATCTGCACAT AGTGGATCTG
GGCCGCAGCC GCCTGCTGAA CCTGGAAGCC TGGGGCATAC GGCCGAAAAA TGTGTATCAG
GGCATGGCCC TGCAGGCGCT GCTCGACCCC GATATCGACA TGGTTATCCT TACGGGGCCC
GCTGGGTGCG GTAAAACCCT GCTGGCCATG GCGGCTGCAC TGGAGCTTGT CGTGGAACGC
AATCAGTACG ACAAGGTGAT AGTGACCCGC AACACGCCGG AAATTGCCGA GTCCATTGGC
TTTTTGCCCG GCACAGAAGA AGAGAAAATG GCCCCCTGGC TTGCGGCCAT CACTGACACC
CTGGAAGTGC TGCACAAAAA CGATGTAAAC CCCCATGGCT CGATGAACTA CATCATGGAA
AAAGCCAATA TCCAGTTCAA ATCCATCAAC TTTATGCGTG GCCGCTCCAT CCAGAATGCC
ATAGTGCTTT TGGATGAATG TCAAAACCTC ACAGCATCGC AAATCAAAAC CATGATCACC
CGCATGGGCG AAGGCACCAA GCTTATCTGC TCGGGTAACC TGGCCCAGAT AGACTCCAAT
TATCTGACCG CCGTAACCTC GGGCCTGACC TACATTGTGG AAAGGTTCAA GAACTTCGAA
GGCAGTGCCA ATGTCTACCT CAATGGTGTG GTCAGATCCC GGCTTGCCGA ATTCGCCGAG
GAGCACCTGT AA
|
|---|
| Protein sequence | MEQDDRKLFV LDTNVLLHEP LAIYSFKEHD VIVPMTVLEE LDQIKDRKRD VSRDARVAIR
ALEDTLGGET TPEQIIAGVP LPAREGHEAT GTLAIFPDHQ LEMSTGGLPG DHNDNRIINT
ALHLQKLHAP RPVVLVTKDI NMRLKAKGAG IKLVEDYRTD QLIDDIRFLT KGFHQFEGNF
WEHLEKVSTT RHGRQTIHEV PLKDLEDDHL YINQYLIDEE SDFCGRVISK DDTHLHIVDL
GRSRLLNLEA WGIRPKNVYQ GMALQALLDP DIDMVILTGP AGCGKTLLAM AAALELVVER
NQYDKVIVTR NTPEIAESIG FLPGTEEEKM APWLAAITDT LEVLHKNDVN PHGSMNYIME
KANIQFKSIN FMRGRSIQNA IVLLDECQNL TASQIKTMIT RMGEGTKLIC SGNLAQIDSN
YLTAVTSGLT YIVERFKNFE GSANVYLNGV VRSRLAEFAE EHL
|
|---|
| |