Gene Sama_3125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3125 
SymbolgroES 
ID4605372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3706197 
End bp3706487 
Gene Length291 bp 
Protein Length96 aa 
Translation table11 
GC content53% 
IMG OID639782541 
Productco-chaperonin GroES 
Protein accessionYP_928997 
Protein GI119776257 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0234] Co-chaperonin GroES (HSP10) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0218784 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATTC GTCCATTACA TGACCGCGTA ATCGTTAAGC GTCTGGAAGT GGAATCCACT 
TCAGCTGGTG GCATCGTGCT GACCGGCAGC GCGGCTGAAA AGTCTACCCG TGGCGAAGTG
CTGGCGGTAG GCAATGGCCG GATCCTTGAA AACGGCACCG TGCGTCCTCT GGACGTGAAA
GTGGGTGACG TGGTGATCTT CAACGAAGGT TACGGCGTGA AGAAAGAAAA AATCGACGGT
CAGGAAGTAC TGATCCTGTC GGAAATGGAT CTGATGGCTG TAGTGGACTA A
 
Protein sequence
MNIRPLHDRV IVKRLEVEST SAGGIVLTGS AAEKSTRGEV LAVGNGRILE NGTVRPLDVK 
VGDVVIFNEG YGVKKEKIDG QEVLILSEMD LMAVVD