Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_3096 |
Symbol | |
ID | 4605343 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 3669787 |
End bp | 3670455 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639782512 |
Product | OmpA family protein |
Protein accession | YP_928968 |
Protein GI | 119776228 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.625816 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.135451 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAAGA AAGCAATTCT TACCCTGACT GGCGTATTTG CCCTGGCTGC TATGGGCACT GGTTGCAGCA CAGTGAACCC CTATACCAAT GAACAGCAAA CTGCCAATGC CACCACTGGC GCCATCATAG GTGCTGTTGC AGGTGCTGCC GTGGGCGTAG CCTCTTCCAG TAAGAGCGAC CGCGGTAAAG GTGCGCTGAT TGGCGCTGCA TCGGGAGCGG CAGTCGGTGG CGGTATCGGT TATTACATGG ATGTGCAGGA AACCAAACTG CGTCAGCAGC TGCAGGCCAG CGGCGTCAGC GTGACCCGCA ATGGTGACAA CATCATTCTG AATATGCCAA ACGACGTGAC CTTTGCCGTG GACAAGACTG ATCTGAGCCC ACGCGCCATG CAGGTATTGG ACTCGGTTGC TCTGGTGGCG AAAGAGTACA GCAAGACCCG TTTGAATGTA CTGGGTTATA CCGATTCAAG TGGCGCAGAC AGCTACAACC TGCGTCTGTC TCAGGTACGG GCTTCGGAAG TGGGCAATTA CCTGCTGAGC AAGGGGGTTG CTGCCGCGCG TGTATCCACT CAGGGCATGG GCGAGGCCAG CCCCATCGCG TCTAACGCCA CCGCAGAGGG CCGTGCCCAA AACCGCCGCG TAGAAATTAT CCTCACGCCT ATTGGCTAA
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Protein sequence | MNKKAILTLT GVFALAAMGT GCSTVNPYTN EQQTANATTG AIIGAVAGAA VGVASSSKSD RGKGALIGAA SGAAVGGGIG YYMDVQETKL RQQLQASGVS VTRNGDNIIL NMPNDVTFAV DKTDLSPRAM QVLDSVALVA KEYSKTRLNV LGYTDSSGAD SYNLRLSQVR ASEVGNYLLS KGVAAARVST QGMGEASPIA SNATAEGRAQ NRRVEIILTP IG
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