| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3087 |
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| Symbol | |
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| ID | 4605334 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3662664 |
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| End bp | 3663395 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639782503 |
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| Product | ABC transporter, ATP-binding protein |
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| Protein accession | YP_928959 |
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| Protein GI | 119776219 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1137] ABC-type (unclassified) transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.187467 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.113266 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCCAAC TGACCCTGAA GGCCAGTAAC CTCGCCAAGA GTTACAAAAA CCGCCAGGTT
GTCAAAAACG TCAGCCTCAC CGTCAATACC GGCCAGGTGG TCGGCTTGTT GGGCCCCAAT
GGTGCCGGTA AAACCACCAC CTTTTATATG GTGGTGGGTC TGGTACAGAG TGACAAGGGC
AGCATACACA TCAATGATGA TGACCTGACG CTGGATCCCA TGCATCTGCG GGCACGCAAG
GGCATTGGCT ATCTGCCACA GGAAGCCAGC ATCTTTCGCA AGCTGTCGGT GCGCGACAAC
ATCATGGCCG TGTTGCAGAT GCGTAAAGAG CTGAACACCG ATGAGCGTGA AGAGGCCTTG
GAGCAACTGC TGGAAGAGTT TCACATCACC CACATTCGTG ACAATCTGGG CATGTCACTC
TCAGGTGGCG AACGTCGCCG GGTCGAGATA GCCCGGGCGC TCGCCGCAAA CCCCAGATTT
ATCCTGTTGG ATGAACCTTT TGCCGGGGTA GACCCCATTT CCGTTATCGA CATCAAAAAG
ATCATCGAGC AATTGAAGAA TCGTGGCCTT GGTGTGCTTA TCACCGACCA CAACGTGAGA
GAAACCCTCG ATGTGTGCGA AAAAGCCTAT ATCGTCAGCC ATGGCGATTT GATTGCCGAA
GGCACTCCTG CCGAAATCCT CGACAATCAG CAGGTGCGTG CAGTGTACTT GGGTGAGCAA
TTCAGGCTAT AG
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| Protein sequence | MTQLTLKASN LAKSYKNRQV VKNVSLTVNT GQVVGLLGPN GAGKTTTFYM VVGLVQSDKG
SIHINDDDLT LDPMHLRARK GIGYLPQEAS IFRKLSVRDN IMAVLQMRKE LNTDEREEAL
EQLLEEFHIT HIRDNLGMSL SGGERRRVEI ARALAANPRF ILLDEPFAGV DPISVIDIKK
IIEQLKNRGL GVLITDHNVR ETLDVCEKAY IVSHGDLIAE GTPAEILDNQ QVRAVYLGEQ
FRL
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